RNA–Protein interactions for RNA: ENST00000515795.1

FAM20C-205, Transcript of FAM20C, golgi associated secretory pathway kinase, humanhuman

TSL 1 (best)

Gene FAM20C, Length 2,177 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20C-205ENST00000515795 PNKPQ96T60 521 aa22.39■■□□□ 1.17
FAM20C-205ENST00000515795 EIF3CQ99613 913 aaKnown RBP22.39■■□□□ 1.17
FAM20C-205ENST00000515795 QTRT2Q9H974 415 aaKnown RBP22.39■■□□□ 1.17
FAM20C-205ENST00000515795 PCDHA12Q9UN75 941 aa22.39■■□□□ 1.17
FAM20C-205ENST00000515795 RHOXF2BP0C7M4 288 aa22.38■■□□□ 1.17
FAM20C-205ENST00000515795 GCFC2P16383 781 aaKnown RBP22.38■■□□□ 1.17
FAM20C-205ENST00000515795 CRKP46108 304 aa22.38■■□□□ 1.17
FAM20C-205ENST00000515795 NLGN1Q8N2Q7 840 aa22.38■■□□□ 1.17
FAM20C-205ENST00000515795 EHBP1Q8NDI1 1231 aa22.38■■□□□ 1.17
FAM20C-205ENST00000515795 IQCDQ96DY2 449 aa22.38■■□□□ 1.17
FAM20C-205ENST00000515795 RHOXF2Q9BQY4 288 aa22.38■■□□□ 1.17
FAM20C-205ENST00000515795 EHD4Q9H223 541 aa22.38■■□□□ 1.17
FAM20C-205ENST00000515795 RAB21Q9UL25 225 aa22.38■■□□□ 1.17
FAM20C-205ENST00000515795 CDK17Q00537 523 aa22.38■■□□□ 1.17
FAM20C-205ENST00000515795 EHHADHQ08426 723 aa22.38■■□□□ 1.17
FAM20C-205ENST00000515795 LRRC41Q15345 812 aa22.38■■□□□ 1.17
FAM20C-205ENST00000515795 MAN2A1Q16706 1144 aa22.38■■□□□ 1.17
FAM20C-205ENST00000515795 TRAPPC11Q7Z392 1133 aa22.38■■□□□ 1.17
FAM20C-205ENST00000515795 HNRNPLLQ8WVV9 542 aaKnown RBP22.38■■□□□ 1.17
FAM20C-205ENST00000515795 KRT27Q7Z3Y8 459 aa22.37■■□□□ 1.17
FAM20C-205ENST00000515795 UBXN6Q9BZV1 441 aa22.37■■□□□ 1.17
FAM20C-205ENST00000515795 LACRTQ9GZZ8 138 aa22.37■■□□□ 1.17
FAM20C-205ENST00000515795 HDAC6Q9UBN7 1215 aa22.37■■□□□ 1.17
FAM20C-205ENST00000515795 ATF5Q9Y2D1 282 aaPredicted RBP22.37■■□□□ 1.17
FAM20C-205ENST00000515795 MYH7BA7E2Y1 1941 aa22.37■■□□□ 1.17
FAM20C-205ENST00000515795 GREB1LQ9C091 1923 aaPredicted RBP22.36■■□□□ 1.17
FAM20C-205ENST00000515795 RCCD1A6NED2 376 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 HOXA7P31268 230 aaPredicted RBP22.36■■□□□ 1.17
FAM20C-205ENST00000515795 CACNB3P54284 484 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 CYP27A1Q02318 531 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 TCP10Q12799 353 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 GLIS3Q8NEA6 775 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 CCDC42Q96M95 316 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 TSG101Q99816 390 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 DNAJC18Q9H819 358 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 DBNDD1Q9H9R9 158 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 KCNQ5Q9NR82 932 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 FAM207AQ9NSI2 230 aaPredicted RBP22.36■■□□□ 1.17
FAM20C-205ENST00000515795 SIK3Q9Y2K2 1263 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 ABCB11O95342 1321 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 FAM196BA6NMK8 535 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 USP17L15C9J2P7 530 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 USP17L13C9JLJ4 530 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 USP17L11C9JVI0 530 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 USP17L18D6R9N7 530 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 USP17L22D6RA61 530 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 USP17L17D6RBQ6 530 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 USP17L19D6RCP7 530 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 USP17L20D6RJB6 530 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 POLR3GO15318 223 aaPredicted RBP22.36■■□□□ 1.17
FAM20C-205ENST00000515795 ATP1A1P05023 1023 aaKnown RBP22.36■■□□□ 1.17
FAM20C-205ENST00000515795 USP17L24Q0WX57 530 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 SMC1AQ14683 1233 aaKnown RBP22.36■■□□□ 1.17
FAM20C-205ENST00000515795 QRICH1Q2TAL8 776 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 USP17L6PQ6QN14 398 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 PKNOX2Q96KN3 472 aa22.36■■□□□ 1.17
FAM20C-205ENST00000515795 NAP1L4Q99733 375 aaKnown RBP22.36■■□□□ 1.17
FAM20C-205ENST00000515795 ERLIN1O75477 346 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 SSBP05455 408 aaKnown RBP eCLIP22.35■■□□□ 1.17
FAM20C-205ENST00000515795 EEF2P13639 858 aaKnown RBP22.35■■□□□ 1.17
FAM20C-205ENST00000515795 PDE6BP35913 854 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 SLC1A4P43007 532 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 FAM193AP78312 1265 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 COASYQ13057 564 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 LRRC55Q6ZSA7 311 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 CCDC84Q86UT8 332 aaPredicted RBP22.35■■□□□ 1.17
FAM20C-205ENST00000515795 MYOCDQ8IZQ8 938 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 NOA1Q8NC60 698 aaKnown RBP22.35■■□□□ 1.17
FAM20C-205ENST00000515795 DNAJC19Q96DA6 116 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 ZDHHC15Q96MV8 337 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 UIMC1Q96RL1 719 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 MMRN2Q9H8L6 949 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 PLAGL2Q9UPG8 496 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 PCDHA1Q9Y5I3 950 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 SAR1BQ9Y6B6 198 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 EPHB6O15197 1021 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 SEPT2Q15019 361 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 KIAA0825Q8IV33 1275 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 NT5C3AQ9H0P0 336 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 GLT8D2Q9H1C3 349 aa22.35■■□□□ 1.17
FAM20C-205ENST00000515795 BMP2KQ9NSY1 1161 aaPredicted RBP22.35■■□□□ 1.17
FAM20C-205ENST00000515795 PLEKP08567 350 aaPredicted RBP22.34■■□□□ 1.17
FAM20C-205ENST00000515795 ERCC3P19447 782 aa22.34■■□□□ 1.17
FAM20C-205ENST00000515795 HNRNPH3P31942 346 aaKnown RBP22.34■■□□□ 1.17
FAM20C-205ENST00000515795 SPA17Q15506 151 aa22.34■■□□□ 1.17
FAM20C-205ENST00000515795 SHROOM1Q2M3G4 852 aaPredicted RBP22.34■■□□□ 1.17
FAM20C-205ENST00000515795 BEND6Q5SZJ8 279 aaPredicted RBP22.34■■□□□ 1.17
FAM20C-205ENST00000515795 PAPD7Q5XG87 772 aaKnown RBP22.34■■□□□ 1.17
FAM20C-205ENST00000515795 C2CD5Q86YS7 1000 aa22.34■■□□□ 1.17
FAM20C-205ENST00000515795 DHX36Q9H2U1 1008 aaKnown RBP22.34■■□□□ 1.17
FAM20C-205ENST00000515795 PANK4Q9NVE7 773 aa22.34■■□□□ 1.17
FAM20C-205ENST00000515795 PCDHAC2Q9Y5I4 1007 aa22.34■■□□□ 1.17
FAM20C-205ENST00000515795 DUSP10Q9Y6W6 482 aa22.34■■□□□ 1.17
FAM20C-205ENST00000515795 KDM3AQ9Y4C1 1321 aa22.34■■□□□ 1.17
FAM20C-205ENST00000515795 OAS2P29728 719 aaKnown RBP22.33■■□□□ 1.17
FAM20C-205ENST00000515795 KIF5AQ12840 1032 aa22.33■■□□□ 1.17
FAM20C-205ENST00000515795 CERKLQ49MI3 558 aaPredicted RBP22.33■■□□□ 1.17
FAM20C-205ENST00000515795 SLFN13Q68D06 897 aa22.33■■□□□ 1.17
FAM20C-205ENST00000515795 PODNQ7Z5L7 613 aa22.33■■□□□ 1.17
FAM20C-205ENST00000515795 COL23A1Q86Y22 540 aaPredicted RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms