RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 CCDC66A2RUB6 948 aa4.79□□□□□ -1.64
HMGCR-213ENST00000515776 GLI4P10075 376 aa4.79□□□□□ -1.64
HMGCR-213ENST00000515776 GUCY2CP25092 1073 aa4.79□□□□□ -1.64
HMGCR-213ENST00000515776 DLX2Q07687 328 aaPredicted RBP4.79□□□□□ -1.64
HMGCR-213ENST00000515776 TCEAL1Q15170 157 aa4.79□□□□□ -1.64
HMGCR-213ENST00000515776 CASC1Q6TDU7 716 aa4.79□□□□□ -1.64
HMGCR-213ENST00000515776 SASS6Q6UVJ0 657 aa4.79□□□□□ -1.64
HMGCR-213ENST00000515776 B3GNT8Q7Z7M8 397 aa4.79□□□□□ -1.64
HMGCR-213ENST00000515776 ZSCAN30Q86W11 494 aa4.79□□□□□ -1.64
HMGCR-213ENST00000515776 SIN3AQ96ST3 1273 aa4.79□□□□□ -1.64
HMGCR-213ENST00000515776 MCMBPQ9BTE3 642 aa4.79□□□□□ -1.64
HMGCR-213ENST00000515776 RBM28Q9NW13 759 aaKnown RBP4.79□□□□□ -1.64
HMGCR-213ENST00000515776 ZNF214Q9UL59 606 aaPredicted RBP4.79□□□□□ -1.64
HMGCR-213ENST00000515776 PPT2Q9UMR5 302 aa4.79□□□□□ -1.64
HMGCR-213ENST00000515776 DIS3Q9Y2L1 958 aaKnown RBP4.79□□□□□ -1.64
HMGCR-213ENST00000515776 KIF3AQ9Y496 699 aa4.79□□□□□ -1.64
HMGCR-213ENST00000515776 DHX57Q6P158 1386 aaKnown RBP4.78□□□□□ -1.64
HMGCR-213ENST00000515776 LTBP3Q9NS15 1303 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 A0A087WZG4 1122 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 K7ESM1 405 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 CBFA2T2O43439 604 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 NOBOXO60393 691 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 PPP1R11O60927 126 aaPredicted RBP4.78□□□□□ -1.64
HMGCR-213ENST00000515776 VAMP4O75379 141 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 PMLP29590 882 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 GTF2A1P52655 376 aaPredicted RBP4.78□□□□□ -1.64
HMGCR-213ENST00000515776 GABPB1Q06547 395 aaPredicted RBP4.78□□□□□ -1.64
HMGCR-213ENST00000515776 PUM1Q14671 1186 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGCR-213ENST00000515776 CARFQ8N187 725 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 ZNF513Q8N8E2 541 aaPredicted RBP4.78□□□□□ -1.64
HMGCR-213ENST00000515776 RBBP8NLQ8NC74 664 aaPredicted RBP4.78□□□□□ -1.64
HMGCR-213ENST00000515776 ADCY4Q8NFM4 1077 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 NOX5Q96PH1 765 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 GPR20Q99678 358 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 GRPEL1Q9HAV7 217 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 DONSONQ9NYP3 566 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 FBLN5Q9UBX5 448 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 FEZ2Q9UHY8 353 aaPredicted RBP4.78□□□□□ -1.64
HMGCR-213ENST00000515776 ISY1Q9ULR0 285 aaKnown RBP4.78□□□□□ -1.64
HMGCR-213ENST00000515776 RWDD3Q9Y3V2 267 aa4.78□□□□□ -1.64
HMGCR-213ENST00000515776 CCDC189A1A4V9 331 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 CNR2P34972 360 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 ZNF76P36508 570 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 SSR1P43307 286 aaKnown RBP4.77□□□□□ -1.65
HMGCR-213ENST00000515776 MFAP1P55081 439 aaKnown RBP4.77□□□□□ -1.65
HMGCR-213ENST00000515776 ZNF394Q53GI3 561 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 HSP90AB4PQ58FF6 505 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 EEF1DP3Q658K8 133 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 RCSD1Q6JBY9 416 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 TSHZ1Q6ZSZ6 1077 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 LZTR1Q8N653 840 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 SMARCC2Q8TAQ2 1214 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 TSPAN17Q96FV3 270 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 PPP1R9BQ96SB3 815 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 CALCOCO1Q9P1Z2 691 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 CNOT11Q9UKZ1 510 aaKnown RBP4.77□□□□□ -1.65
HMGCR-213ENST00000515776 PCDHGB7Q9Y5F8 929 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 PRDM2Q13029 1718 aa4.77□□□□□ -1.65
HMGCR-213ENST00000515776 AURKAO14965 403 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 SARSP49591 514 aaKnown RBP4.76□□□□□ -1.65
HMGCR-213ENST00000515776 MTA1Q13330 715 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 ZNF827Q17R98 1081 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 DPY19L1Q2PZI1 675 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 RINLQ6ZS11 566 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 ANKRD23Q86SG2 305 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 CABP7Q86V35 215 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 CPNE8Q86YQ8 564 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 RNF34Q969K3 372 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 ITFG2Q969R8 447 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 HAUS7Q99871 368 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 LNPKQ9C0E8 428 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 SPATA6Q9NWH7 488 aaPredicted RBP4.76□□□□□ -1.65
HMGCR-213ENST00000515776 PALD1Q9ULE6 856 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 MYRFQ9Y2G1 1151 aa4.76□□□□□ -1.65
HMGCR-213ENST00000515776 SMG6Q86US8 1419 aaKnown RBP4.75□□□□□ -1.65
HMGCR-213ENST00000515776 STXBP3O00186 592 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 KIF1CO43896 1103 aaKnown RBP4.75□□□□□ -1.65
HMGCR-213ENST00000515776 MAGEA10P43363 369 aaPredicted RBP4.75□□□□□ -1.65
HMGCR-213ENST00000515776 SEPHS1P49903 392 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 GJA9P57773 515 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 CACNB2Q08289 660 aaPredicted RBP4.75□□□□□ -1.65
HMGCR-213ENST00000515776 CCDC173Q0VFZ6 552 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 SLC9A5Q14940 896 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 GNPTABQ3T906 1256 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 ICE2Q659A1 982 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 HEATR6Q6AI08 1181 aaKnown RBP4.75□□□□□ -1.65
HMGCR-213ENST00000515776 CTR9Q6PD62 1173 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 CCDC81Q6ZN84 652 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 ADAT2Q7Z6V5 191 aaKnown RBP4.75□□□□□ -1.65
HMGCR-213ENST00000515776 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGCR-213ENST00000515776 FAM177A1Q8N128 213 aaPredicted RBP4.75□□□□□ -1.65
HMGCR-213ENST00000515776 USP33Q8TEY7 942 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 MKL1Q969V6 931 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 ZBTB8AQ96BR9 441 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 PEX11GQ96HA9 241 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 MTA3Q9BTC8 594 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 WHRNQ9P202 907 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 GULP1Q9UBP9 304 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 NUDT5Q9UKK9 219 aa4.75□□□□□ -1.65
HMGCR-213ENST00000515776 PCDHB10Q9UN67 800 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms