RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 BMP8BP34820 402 aa18.15■□□□□ 0.5
SERF1B-208ENST00000515588 METAP2P50579 478 aaKnown RBP eCLIP18.15■□□□□ 0.5
SERF1B-208ENST00000515588 EVCP57679 992 aa18.15■□□□□ 0.5
SERF1B-208ENST00000515588 MDM2Q00987 491 aaPredicted RBP18.15■□□□□ 0.5
SERF1B-208ENST00000515588 FAAP100Q0VG06 881 aa18.15■□□□□ 0.5
SERF1B-208ENST00000515588 TOB2Q14106 344 aaPredicted RBP18.15■□□□□ 0.5
SERF1B-208ENST00000515588 WWC2Q6AWC2 1192 aa18.15■□□□□ 0.5
SERF1B-208ENST00000515588 TYW1BQ6NUM6 668 aa18.15■□□□□ 0.5
SERF1B-208ENST00000515588 HEATR3Q7Z4Q2 680 aa18.15■□□□□ 0.5
SERF1B-208ENST00000515588 UPF3BQ9BZI7 483 aaKnown RBP18.15■□□□□ 0.5
SERF1B-208ENST00000515588 TM6SF1Q9BZW5 370 aa18.15■□□□□ 0.5
SERF1B-208ENST00000515588 PSTPIP2Q9H939 334 aa18.15■□□□□ 0.5
SERF1B-208ENST00000515588 PRDM5Q9NQX1 630 aaPredicted RBP18.15■□□□□ 0.5
SERF1B-208ENST00000515588 DDX41Q9UJV9 622 aaKnown RBP18.15■□□□□ 0.5
SERF1B-208ENST00000515588 NID2Q14112 1375 aa18.15■□□□□ 0.5
SERF1B-208ENST00000515588 A6NJR5 290 aa18.14■□□□□ 0.49
SERF1B-208ENST00000515588 ZEB2O60315 1214 aa18.14■□□□□ 0.49
SERF1B-208ENST00000515588 CABYRO75952 493 aa18.14■□□□□ 0.49
SERF1B-208ENST00000515588 ITGB8P26012 769 aa18.14■□□□□ 0.49
SERF1B-208ENST00000515588 PSMC6P62333 389 aa18.14■□□□□ 0.49
SERF1B-208ENST00000515588 MRPS9P82933 396 aaKnown RBP18.14■□□□□ 0.49
SERF1B-208ENST00000515588 ARHGAP1Q07960 439 aa18.14■□□□□ 0.49
SERF1B-208ENST00000515588 SLC43A3Q8NBI5 491 aa18.14■□□□□ 0.49
SERF1B-208ENST00000515588 SMARCC2Q8TAQ2 1214 aa18.14■□□□□ 0.49
SERF1B-208ENST00000515588 TOX2Q96NM4 488 aa18.14■□□□□ 0.49
SERF1B-208ENST00000515588 CYP46A1Q9Y6A2 500 aa18.14■□□□□ 0.49
SERF1B-208ENST00000515588 LAMA2P24043 3122 aaKnown RBP18.14■□□□□ 0.49
SERF1B-208ENST00000515588 KIAA1217Q5T5P2 1943 aa18.13■□□□□ 0.49
SERF1B-208ENST00000515588 CLTBP09497 229 aa18.13■□□□□ 0.49
SERF1B-208ENST00000515588 PDIA3P30101 505 aaKnown RBP18.13■□□□□ 0.49
SERF1B-208ENST00000515588 CCND2P30279 289 aa18.13■□□□□ 0.49
SERF1B-208ENST00000515588 CPT1AP50416 773 aa18.13■□□□□ 0.49
SERF1B-208ENST00000515588 PURAQ00577 322 aaKnown RBP18.13■□□□□ 0.49
SERF1B-208ENST00000515588 ITGA7Q13683 1181 aa18.13■□□□□ 0.49
SERF1B-208ENST00000515588 UBE2SQ16763 222 aa18.13■□□□□ 0.49
SERF1B-208ENST00000515588 CUL5Q93034 780 aa18.13■□□□□ 0.49
SERF1B-208ENST00000515588 LARP6Q9BRS8 491 aaKnown RBP18.13■□□□□ 0.49
SERF1B-208ENST00000515588 PRKAG2Q9UGJ0 569 aa18.13■□□□□ 0.49
SERF1B-208ENST00000515588 MRVI1Q9Y6F6 885 aa18.13■□□□□ 0.49
SERF1B-208ENST00000515588 SZT2Q5T011 3432 aa18.13■□□□□ 0.49
SERF1B-208ENST00000515588 KIAA0355O15063 1070 aa18.12■□□□□ 0.49
SERF1B-208ENST00000515588 SEC24BO95487 1268 aa18.12■□□□□ 0.49
SERF1B-208ENST00000515588 GH1P01241 217 aa18.12■□□□□ 0.49
SERF1B-208ENST00000515588 MYL3P08590 195 aa18.12■□□□□ 0.49
SERF1B-208ENST00000515588 SP2Q02086 613 aa18.12■□□□□ 0.49
SERF1B-208ENST00000515588 NTRK3Q16288 839 aa18.12■□□□□ 0.49
SERF1B-208ENST00000515588 FAM126BQ8IXS8 530 aa18.12■□□□□ 0.49
SERF1B-208ENST00000515588 AFG1LQ8WV93 481 aa18.12■□□□□ 0.49
SERF1B-208ENST00000515588 CCDC196A0A1B0GTZ2 297 aa18.11■□□□□ 0.49
SERF1B-208ENST00000515588 DCDC2CA8MYV0 355 aa18.11■□□□□ 0.49
SERF1B-208ENST00000515588 STXBP3O00186 592 aa18.11■□□□□ 0.49
SERF1B-208ENST00000515588 FXR1P51114 621 aaKnown RBP eCLIP18.11■□□□□ 0.49
SERF1B-208ENST00000515588 BADQ92934 168 aa18.11■□□□□ 0.49
SERF1B-208ENST00000515588 LBHD1Q9BQE6 289 aaPredicted RBP18.11■□□□□ 0.49
SERF1B-208ENST00000515588 NCOA5Q9HCD5 579 aaKnown RBP18.11■□□□□ 0.49
SERF1B-208ENST00000515588 TMEM39AQ9NV64 488 aa18.11■□□□□ 0.49
SERF1B-208ENST00000515588 POLR3EQ9NVU0 708 aa18.11■□□□□ 0.49
SERF1B-208ENST00000515588 BARHL2Q9NY43 387 aa18.11■□□□□ 0.49
SERF1B-208ENST00000515588 RTEL1Q9NZ71 1219 aa18.11■□□□□ 0.49
SERF1B-208ENST00000515588 LTBP2Q14767 1821 aa18.1■□□□□ 0.49
SERF1B-208ENST00000515588 MROH7Q68CQ1 1323 aa18.1■□□□□ 0.49
SERF1B-208ENST00000515588 PPFIA3O75145 1194 aa18.1■□□□□ 0.49
SERF1B-208ENST00000515588 MMP3P08254 477 aa18.1■□□□□ 0.49
SERF1B-208ENST00000515588 NAPAP54920 295 aa18.1■□□□□ 0.49
SERF1B-208ENST00000515588 CCT2P78371 535 aaKnown RBP18.1■□□□□ 0.49
SERF1B-208ENST00000515588 SEMA3FQ13275 785 aa18.1■□□□□ 0.49
SERF1B-208ENST00000515588 PKN1Q16512 942 aa18.1■□□□□ 0.49
SERF1B-208ENST00000515588 PCNX4Q63HM2 1172 aa18.1■□□□□ 0.49
SERF1B-208ENST00000515588 EMID1Q96A84 441 aaPredicted RBP18.1■□□□□ 0.49
SERF1B-208ENST00000515588 INPP4AQ96PE3 977 aaPredicted RBP18.1■□□□□ 0.49
SERF1B-208ENST00000515588 MTG1Q9BT17 334 aaPredicted RBP18.1■□□□□ 0.49
SERF1B-208ENST00000515588 UBE2OQ9C0C9 1292 aaKnown RBP18.1■□□□□ 0.49
SERF1B-208ENST00000515588 BCAS3Q9H6U6 928 aa18.1■□□□□ 0.49
SERF1B-208ENST00000515588 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
SERF1B-208ENST00000515588 TBX21Q9UL17 535 aa18.1■□□□□ 0.49
SERF1B-208ENST00000515588 A0A1W2PPC1 479 aa18.09■□□□□ 0.49
SERF1B-208ENST00000515588 SORBS3O60504 671 aa18.09■□□□□ 0.49
SERF1B-208ENST00000515588 CD4P01730 458 aa18.09■□□□□ 0.49
SERF1B-208ENST00000515588 UBA1P22314 1058 aaKnown RBP18.09■□□□□ 0.49
SERF1B-208ENST00000515588 PFKFB3Q16875 520 aaPredicted RBP18.09■□□□□ 0.49
SERF1B-208ENST00000515588 BRDTQ58F21 947 aaPredicted RBP18.09■□□□□ 0.49
SERF1B-208ENST00000515588 CELF3Q5SZQ8 465 aaKnown RBP18.09■□□□□ 0.49
SERF1B-208ENST00000515588 MYSM1Q5VVJ2 828 aa18.09■□□□□ 0.49
SERF1B-208ENST00000515588 PPP1R18Q6NYC8 613 aa18.09■□□□□ 0.49
SERF1B-208ENST00000515588 KCNV1Q6PIU1 500 aa18.09■□□□□ 0.49
SERF1B-208ENST00000515588 PPP1R13LQ8WUF5 828 aa18.09■□□□□ 0.49
SERF1B-208ENST00000515588 PHKBQ93100 1093 aa18.09■□□□□ 0.49
SERF1B-208ENST00000515588 RIC8AQ9NPQ8 531 aa18.09■□□□□ 0.49
SERF1B-208ENST00000515588 PCDHA6Q9UN73 950 aa18.09■□□□□ 0.49
SERF1B-208ENST00000515588 PCDHA8Q9Y5H6 950 aa18.09■□□□□ 0.49
SERF1B-208ENST00000515588 SCN10AQ9Y5Y9 1956 aa18.08■□□□□ 0.49
SERF1B-208ENST00000515588 SPATA31C2B4DYI2 1134 aa18.08■□□□□ 0.48
SERF1B-208ENST00000515588 ADAMTS3O15072 1205 aa18.08■□□□□ 0.48
SERF1B-208ENST00000515588 PRPF3O43395 683 aaKnown RBP18.08■□□□□ 0.48
SERF1B-208ENST00000515588 KPNA6O60684 536 aa18.08■□□□□ 0.48
SERF1B-208ENST00000515588 STAM2O75886 525 aa18.08■□□□□ 0.48
SERF1B-208ENST00000515588 TGFB3P10600 412 aa18.08■□□□□ 0.48
SERF1B-208ENST00000515588 SCG2P13521 617 aa18.08■□□□□ 0.48
SERF1B-208ENST00000515588 ICAM3P32942 547 aa18.08■□□□□ 0.48
SERF1B-208ENST00000515588 ANAPC15P60006 121 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms