RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 CRISPLD2Q9H0B8 497 aa13.61□□□□□ -0.23
SNF8-215ENST00000515572 BRMS1Q9HCU9 246 aa13.61□□□□□ -0.23
SNF8-215ENST00000515572 TMEM260Q9NX78 707 aa13.61□□□□□ -0.23
SNF8-215ENST00000515572 DDX49Q9Y6V7 483 aaKnown RBP13.61□□□□□ -0.23
SNF8-215ENST00000515572 M0R2N6 131 aa13.6□□□□□ -0.23
SNF8-215ENST00000515572 DTNBO60941 627 aa13.6□□□□□ -0.23
SNF8-215ENST00000515572 DUSP11O75319 330 aaKnown RBP13.6□□□□□ -0.23
SNF8-215ENST00000515572 TNFAIP2Q03169 654 aa13.6□□□□□ -0.23
SNF8-215ENST00000515572 NPY5RQ15761 445 aa13.6□□□□□ -0.23
SNF8-215ENST00000515572 GNPTABQ3T906 1256 aa13.6□□□□□ -0.23
SNF8-215ENST00000515572 LHX8Q68G74 356 aa13.6□□□□□ -0.23
SNF8-215ENST00000515572 U2AF1L4Q8WU68 220 aaKnown RBP13.6□□□□□ -0.23
SNF8-215ENST00000515572 INTS4Q96HW7 963 aaKnown RBP13.6□□□□□ -0.23
SNF8-215ENST00000515572 KCNJ14Q9UNX9 436 aa13.6□□□□□ -0.23
SNF8-215ENST00000515572 SMC3Q9UQE7 1217 aa13.6□□□□□ -0.23
SNF8-215ENST00000515572 NKRFO15226 690 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNF8-215ENST00000515572 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
SNF8-215ENST00000515572 MMP1P03956 469 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 TGFB3P10600 412 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 KRT2P35908 639 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 ADCYAP1R1P41586 468 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 MRPS9P82933 396 aaKnown RBP13.59□□□□□ -0.23
SNF8-215ENST00000515572 TTLL4Q14679 1199 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 SAFBQ15424 915 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNF8-215ENST00000515572 KRT25Q7Z3Z0 450 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 NLRX1Q86UT6 975 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 ANKLE1Q8NAG6 615 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 INPP4AQ96PE3 977 aaPredicted RBP13.59□□□□□ -0.23
SNF8-215ENST00000515572 WDR11Q9BZH6 1224 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 SPC25Q9HBM1 224 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 XPNPEP3Q9NQH7 507 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 PDGFCQ9NRA1 345 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 GJB4Q9NTQ9 266 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 OGDHLQ9ULD0 1010 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 Q9Y3F1 56 aa13.59□□□□□ -0.23
SNF8-215ENST00000515572 KIAA0100Q14667 2235 aaKnown RBP13.58□□□□□ -0.24
SNF8-215ENST00000515572 ADAMTS3O15072 1205 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 FIBPO43427 364 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 CYP3A4P08684 503 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 TXNP10599 105 aaKnown RBP13.58□□□□□ -0.24
SNF8-215ENST00000515572 GJB2P29033 226 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 ARHGAP4P98171 946 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 DUSP28Q4G0W2 176 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 KRT40Q6A162 431 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 CCDC62Q6P9F0 684 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 SEPT14Q6ZU15 432 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 ARRDC4Q8NCT1 418 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 FBXO18Q8NFZ0 1043 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 RASGRP4Q8TDF6 673 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 GPRASP2Q96D09 838 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 CDHR1Q96JP9 859 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 PGBD1Q96JS3 809 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 GNEQ9Y223 722 aaKnown RBP13.58□□□□□ -0.24
SNF8-215ENST00000515572 MRVI1Q9Y6F6 885 aa13.58□□□□□ -0.24
SNF8-215ENST00000515572 CCDC194A0A1B0GVG4 234 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 POTEFA5A3E0 1075 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 MAFGO15525 162 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 RGS20O76081 388 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 SMPD1P17405 629 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 ICAM3P32942 547 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 USP11P51784 963 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 NKX3-2P78367 333 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 MTMR1Q13613 665 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 NONOQ15233 471 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNF8-215ENST00000515572 NIPA1Q7RTP0 329 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 RNF180Q86T96 592 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 DIS3L2Q8IYB7 885 aaKnown RBP13.57□□□□□ -0.24
SNF8-215ENST00000515572 CRYGNQ8WXF5 182 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 AP5M1Q9H0R1 490 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 UPF3AQ9H1J1 476 aaKnown RBP13.57□□□□□ -0.24
SNF8-215ENST00000515572 JADE2Q9NQC1 790 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 RTEL1Q9NZ71 1219 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 UBIAD1Q9Y5Z9 338 aa13.57□□□□□ -0.24
SNF8-215ENST00000515572 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.56□□□□□ -0.24
SNF8-215ENST00000515572 SPATA31C2B4DYI2 1134 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 DNM1LO00429 736 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 ADCY6O43306 1168 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 ITGB5P18084 799 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 PDCP20941 246 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 CST5P28325 142 aaPredicted RBP13.56□□□□□ -0.24
SNF8-215ENST00000515572 CIITAP33076 1130 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 ZNF76P36508 570 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 FOSBP53539 338 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 SOX10P56693 466 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 GJA9P57773 515 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 CEP55Q53EZ4 464 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 ANO1Q5XXA6 986 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 TLK2Q86UE8 772 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 MXRA8Q9BRK3 442 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 FOXP1Q9H334 677 aaPredicted RBP13.56□□□□□ -0.24
SNF8-215ENST00000515572 DDX41Q9UJV9 622 aaKnown RBP13.56□□□□□ -0.24
SNF8-215ENST00000515572 SYNRGQ9UMZ2 1314 aa13.56□□□□□ -0.24
SNF8-215ENST00000515572 CENPFP49454 3210 aa13.55□□□□□ -0.24
SNF8-215ENST00000515572 BTBD18B2RXH4 712 aa13.55□□□□□ -0.24
SNF8-215ENST00000515572 MEIS1O00470 390 aa13.55□□□□□ -0.24
SNF8-215ENST00000515572 ADAMTS4O75173 837 aa13.55□□□□□ -0.24
SNF8-215ENST00000515572 ARIH2O95376 493 aa13.55□□□□□ -0.24
SNF8-215ENST00000515572 GH1P01241 217 aa13.55□□□□□ -0.24
SNF8-215ENST00000515572 HSP90AA1P07900 732 aaKnown RBP13.55□□□□□ -0.24
SNF8-215ENST00000515572 EN2P19622 333 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms