RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 IQCB1Q15051 598 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 ECM1Q16610 540 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 TMEM266Q2M3C6 531 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 Q4G0T1 1027 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 MCF2L2Q86YR7 1114 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 ELOA2Q8IYF1 753 aaPredicted RBP10.32□□□□□ -0.76
CPNE4-213ENST00000515418 SYTL5Q8TDW5 730 aaPredicted RBP10.32□□□□□ -0.76
CPNE4-213ENST00000515418 SMARCE1Q969G3 411 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 NAP1L4Q99733 375 aaKnown RBP10.32□□□□□ -0.76
CPNE4-213ENST00000515418 USP25Q9UHP3 1055 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 HOOK1Q9UJC3 728 aaKnown RBP10.32□□□□□ -0.76
CPNE4-213ENST00000515418 MAN1B1Q9UKM7 699 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 CXCL11O14625 94 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 FDX1P10109 184 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 ARP10275 920 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 EIF2AK2P19525 551 aaKnown RBP10.31□□□□□ -0.76
CPNE4-213ENST00000515418 DPYDQ12882 1025 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 GRB10Q13322 594 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 PPIL2Q13356 520 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 MOGSQ13724 837 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 MOXD1Q6UVY6 613 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 RNF207Q6ZRF8 634 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 DHX40Q8IX18 779 aaKnown RBP10.31□□□□□ -0.76
CPNE4-213ENST00000515418 PNMA5Q96PV4 448 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 R3HDMLQ9H3Y0 253 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 BTBD7Q9P203 1132 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 CCDC39Q9UFE4 941 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 KCNH4Q9UQ05 1017 aa10.31□□□□□ -0.76
CPNE4-213ENST00000515418 CELF2O95319 508 aaKnown RBP10.3□□□□□ -0.76
CPNE4-213ENST00000515418 UVSSAQ2YD98 709 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 NT5DC1Q5TFE4 455 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 PLA2G4DQ86XP0 818 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 SPATA20Q8TB22 786 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 SNX29Q8TEQ0 813 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 ASCC2Q9H1I8 757 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-213ENST00000515418 MYCLP12524 364 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-213ENST00000515418 ITGB5P18084 799 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 HOXA7P31268 230 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-213ENST00000515418 IRX3P78415 501 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-213ENST00000515418 CEP55Q53EZ4 464 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 KRT79Q5XKE5 535 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 KCNK18Q7Z418 384 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 SLFN12Q8IYM2 578 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 AOPEPQ8N6M6 819 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 PROCA1Q8NCQ7 364 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-213ENST00000515418 CALML4Q96GE6 196 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 RMDN3Q96TC7 470 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 PAGR1Q9BTK6 254 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 TEX13BQ9BXU2 312 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 RAB34Q9BZG1 259 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 PKD2L1Q9P0L9 805 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 PCNTO95613 3336 aa10.3□□□□□ -0.76
CPNE4-213ENST00000515418 MEIS1O00470 390 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 ATP2A1O14983 1001 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 OAZ1P54368 228 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 MRPS9P82933 396 aaKnown RBP10.29□□□□□ -0.76
CPNE4-213ENST00000515418 SPIRE1Q08AE8 756 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 MORC3Q14149 939 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 MCM6Q14566 821 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 CST9Q5W186 159 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 NCAPH2Q6IBW4 605 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 GPAT2Q6NUI2 795 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 LBX2Q6XYB7 198 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 SMYD4Q8IYR2 804 aaPredicted RBP10.29□□□□□ -0.76
CPNE4-213ENST00000515418 ANP32BQ92688 251 aaKnown RBP10.29□□□□□ -0.76
CPNE4-213ENST00000515418 CDK5RAP3Q96JB5 506 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 FAM20AQ96MK3 541 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 PYM1Q9BRP8 204 aaKnown RBP10.29□□□□□ -0.76
CPNE4-213ENST00000515418 WDR11Q9BZH6 1224 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 EHMT1Q9H9B1 1298 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 BLOC1S4Q9NUP1 217 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 KBTBD4Q9NVX7 518 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 RPTORQ8N122 1335 aa10.29□□□□□ -0.76
CPNE4-213ENST00000515418 BECN2A8MW95 431 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 EML1O00423 815 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 TBX3O15119 743 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 GTPBP6O43824 516 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-213ENST00000515418 SMC2O95347 1197 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 CCT6AP40227 531 aaKnown RBP10.28□□□□□ -0.76
CPNE4-213ENST00000515418 HERVK_113P62684 666 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 GHRHRQ02643 423 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 PGM5Q15124 567 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 Q3C1V9 767 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 CCDC34Q96HJ3 373 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 MXRA8Q9BRK3 442 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 NAT10Q9H0A0 1025 aaKnown RBP10.28□□□□□ -0.76
CPNE4-213ENST00000515418 GBA2Q9HCG7 927 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-213ENST00000515418 TXNRD2Q9NNW7 524 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 A1CFQ9NQ94 594 aaKnown RBP10.28□□□□□ -0.76
CPNE4-213ENST00000515418 PXMP2Q9NR77 195 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 CYP39A1Q9NYL5 469 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 AGTPBP1Q9UPW5 1226 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 KIAA1024Q9UPX6 916 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 POTEB3A0JP26 581 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 CHMP2AO43633 222 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 COBLO75128 1261 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 MED24O75448 989 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 ADCY5O95622 1261 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 CAVIN2O95810 425 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 CD44P16070 742 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms