RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 NEURL1BA8MQ27 555 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 IL17REQ8NFR9 667 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 GJA10Q969M2 543 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 FMO2Q99518 471 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 ELAC2Q9BQ52 826 aaKnown RBP14.43□□□□□ -0.1
TCOF1-214ENST00000515035 TTC37Q6PGP7 1564 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 MYOM2P54296 1465 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 LOC102724428A0A0B4J2F2 783 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 TADA3O75528 432 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 SIK1P57059 783 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 MAPKAPK5Q8IW41 473 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 HDAC11Q96DB2 347 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 DHTKD1Q96HY7 919 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-214ENST00000515035 FTOQ9C0B1 505 aaKnown RBP eCLIP14.43□□□□□ -0.1
TCOF1-214ENST00000515035 COL4A3BPQ9Y5P4 624 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 FGAP02671 866 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 CTSWP56202 376 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 DLGAP5Q15398 846 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 GRAMD1BQ3KR37 738 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 SGO2Q562F6 1265 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 ZC3H18Q86VM9 953 aaKnown RBP14.43□□□□□ -0.1
TCOF1-214ENST00000515035 CCDC24Q8N4L8 307 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 CEP70Q8NHQ1 597 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 PBKQ96KB5 322 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 PANX2Q96RD6 677 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 MAGEF1Q9HAY2 307 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 NFU1Q9UMS0 254 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 ZBTB12Q9Y330 459 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-214ENST00000515035 KDM5CP41229 1560 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 ATP7BP35670 1465 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 KDM5AP29375 1690 aaKnown RBP14.43□□□□□ -0.1
TCOF1-214ENST00000515035 SEPT2Q15019 361 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 ZYXQ15942 572 aaKnown RBP14.42□□□□□ -0.1
TCOF1-214ENST00000515035 IFNL3Q8IZI9 196 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 PRPF31Q8WWY3 499 aaKnown RBP14.42□□□□□ -0.1
TCOF1-214ENST00000515035 ANKFY1Q9P2R3 1169 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 ANAPC5Q9UJX4 755 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.42□□□□□ -0.1
TCOF1-214ENST00000515035 TSPOAP1O95153 1857 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 USP17L12C9JPN9 530 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 USP17L21D6R901 530 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 H7C0C1 242 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 P4HA1P13674 534 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 MSH2P43246 934 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 ATP5OP48047 213 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 ZBED6P86452 979 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 ARID5BQ14865 1188 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 LINC00301Q8NCQ3 95 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 CNKSR1Q969H4 720 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 CCDC127Q96BQ5 260 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 KCNG1Q9UIX4 513 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 MAN1B1Q9UKM7 699 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 PACSIN2Q9UNF0 486 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-214ENST00000515035 H0Y3Z8 333 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 CYP27A1Q02318 531 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 TRIML2Q8N7C3 387 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 NSUN7Q8NE18 718 aaKnown RBP14.42□□□□□ -0.1
TCOF1-214ENST00000515035 P2RX5Q93086 422 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 WDR17Q8IZU2 1322 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 SGK1O00141 431 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 NOP56O00567 594 aaKnown RBP14.42□□□□□ -0.1
TCOF1-214ENST00000515035 HSPA6P17066 643 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 EEF1B2P24534 225 aaKnown RBP14.42□□□□□ -0.1
TCOF1-214ENST00000515035 SNX1Q13596 522 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 MAN2A1Q16706 1144 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 CYTH2Q99418 400 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 NCAPGQ9BPX3 1015 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 CARMIL3Q8ND23 1372 aa14.42□□□□□ -0.1
TCOF1-214ENST00000515035 EEF1DP29692 281 aaKnown RBP14.41□□□□□ -0.1
TCOF1-214ENST00000515035 POLR2BP30876 1174 aaKnown RBP14.41□□□□□ -0.1
TCOF1-214ENST00000515035 TTBK2Q6IQ55 1244 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 DCLK2Q8N568 766 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 RIOK1Q9BRS2 568 aaKnown RBP14.41□□□□□ -0.1
TCOF1-214ENST00000515035 SMYD2Q9NRG4 433 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 K7ENM7 598 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 MAPK13O15264 365 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 MT-ND3P03897 115 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 ATP1A3P13637 1013 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 STX1BP61266 288 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 ACTN3Q08043 901 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-214ENST00000515035 KMT5BQ4FZB7 885 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 NSMFQ6X4W1 530 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 CPXCR1Q8N123 301 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 ZNF408Q9H9D4 720 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 NHEJ1Q9H9Q4 299 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-214ENST00000515035 ROBO2Q9HCK4 1378 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 ATP2B4P23634 1241 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 EIF4A3P38919 411 aaKnown RBP14.41□□□□□ -0.1
TCOF1-214ENST00000515035 ECE1P42892 770 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 GRAMD1CQ8IYS0 662 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 GPKOWQ92917 476 aaPredicted RBP eCLIP14.41□□□□□ -0.1
TCOF1-214ENST00000515035 ZMYND12Q9H0C1 365 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 HAUS2Q9NVX0 235 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 CA4P22748 312 aa14.41□□□□□ -0.1
TCOF1-214ENST00000515035 CACYBPQ9HB71 228 aaKnown RBP14.41□□□□□ -0.1
TCOF1-214ENST00000515035 ZCCHC17Q9NP64 241 aaKnown RBP14.41□□□□□ -0.1
TCOF1-214ENST00000515035 ARPP21Q9UBL0 812 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-214ENST00000515035 DLATP10515 647 aaKnown RBP14.4□□□□□ -0.1
TCOF1-214ENST00000515035 TNFAIP1Q13829 316 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 LLGL1Q15334 1064 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms