RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 LRRC47Q8N1G4 583 aaKnown RBP19.46■□□□□ 0.71
SNX2-213ENST00000514949 SNX29Q8TEQ0 813 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 PCMTD1Q96MG8 357 aaPredicted RBP19.46■□□□□ 0.71
SNX2-213ENST00000514949 NAP1L4Q99733 375 aaKnown RBP19.46■□□□□ 0.71
SNX2-213ENST00000514949 CALCOCO1Q9P1Z2 691 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 TFR2Q9UP52 801 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 POTEMA6NI47 508 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 PPP1R11O60927 126 aaPredicted RBP19.46■□□□□ 0.71
SNX2-213ENST00000514949 MRPL12P52815 198 aaKnown RBP19.46■□□□□ 0.71
SNX2-213ENST00000514949 GTF2IP78347 998 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 SPA17Q15506 151 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 ZCWPW2Q504Y3 356 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 DPP8Q6V1X1 898 aaPredicted RBP19.46■□□□□ 0.71
SNX2-213ENST00000514949 ADGRF4Q8IZF3 695 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 DDX12PQ92771 950 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 HAS1Q92839 578 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 DNAJC19Q96DA6 116 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 NUDT12Q9BQG2 462 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 PDE11AQ9HCR9 933 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 ARHGAP20Q9P2F6 1191 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 ADAM21Q9UKJ8 722 aa19.46■□□□□ 0.71
SNX2-213ENST00000514949 ITIH3Q06033 890 aa19.45■□□□□ 0.7
SNX2-213ENST00000514949 ZNF572Q7Z3I7 529 aaPredicted RBP19.45■□□□□ 0.7
SNX2-213ENST00000514949 TRIM58Q8NG06 486 aa19.45■□□□□ 0.7
SNX2-213ENST00000514949 CUL5Q93034 780 aa19.45■□□□□ 0.7
SNX2-213ENST00000514949 SECISBP2LQ93073 1101 aaKnown RBP19.45■□□□□ 0.7
SNX2-213ENST00000514949 DDX4Q9NQI0 724 aaKnown RBP19.45■□□□□ 0.7
SNX2-213ENST00000514949 C6orf229H3BNL8 230 aa19.45■□□□□ 0.7
SNX2-213ENST00000514949 SHMT1P34896 483 aa19.45■□□□□ 0.7
SNX2-213ENST00000514949 KCNK18Q7Z418 384 aa19.45■□□□□ 0.7
SNX2-213ENST00000514949 GLT8D2Q9H1C3 349 aa19.45■□□□□ 0.7
SNX2-213ENST00000514949 ATF5Q9Y2D1 282 aaPredicted RBP19.45■□□□□ 0.7
SNX2-213ENST00000514949 JRKLQ9Y4A0 524 aa19.45■□□□□ 0.7
SNX2-213ENST00000514949 ZBTB5O15062 677 aa19.44■□□□□ 0.7
SNX2-213ENST00000514949 USO1O60763 962 aaKnown RBP19.44■□□□□ 0.7
SNX2-213ENST00000514949 DYMQ7RTS9 669 aa19.44■□□□□ 0.7
SNX2-213ENST00000514949 BAP1Q92560 729 aa19.44■□□□□ 0.7
SNX2-213ENST00000514949 SUGCTQ9HAC7 445 aa19.44■□□□□ 0.7
SNX2-213ENST00000514949 GPCPD1Q9NPB8 672 aa19.44■□□□□ 0.7
SNX2-213ENST00000514949 DDX25Q9UHL0 483 aaKnown RBP19.44■□□□□ 0.7
SNX2-213ENST00000514949 SPATA31A6Q5VVP1 1343 aa19.44■□□□□ 0.7
SNX2-213ENST00000514949 EPHB6O15197 1021 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 PJA2O43164 708 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 TNNI2P48788 182 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 CYP27A1Q02318 531 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 DDR1Q08345 913 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 GJD4Q96KN9 370 aaPredicted RBP19.43■□□□□ 0.7
SNX2-213ENST00000514949 TSG101Q99816 390 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 NT5C3AQ9H0P0 336 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 SH2D4AQ9H788 454 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 MED4Q9NPJ6 270 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 ATP6V0A2Q9Y487 856 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 PCDHA13Q9Y5I0 950 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 DUSP10Q9Y6W6 482 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 MYH7BA7E2Y1 1941 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 KDM3AQ9Y4C1 1321 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 ERICH4A6NGS2 130 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 POLRMTO00411 1230 aaKnown RBP19.43■□□□□ 0.7
SNX2-213ENST00000514949 MAPK8IP2Q13387 824 aaPredicted RBP19.43■□□□□ 0.7
SNX2-213ENST00000514949 ASTE1Q2TB18 679 aaPredicted RBP19.43■□□□□ 0.7
SNX2-213ENST00000514949 MAP9Q49MG5 647 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 HHIPL2Q6UWX4 724 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
SNX2-213ENST00000514949 MYOCDQ8IZQ8 938 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 CERS5Q8N5B7 392 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 EHD4Q9H223 541 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 ACBD3Q9H3P7 528 aa19.43■□□□□ 0.7
SNX2-213ENST00000514949 SSU72P8A0A1W2PR75 194 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 SRGAP2O75044 1071 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 AARSP49588 968 aaKnown RBP eCLIP19.42■□□□□ 0.73e-6■■■■■ 30
SNX2-213ENST00000514949 KIF11P52732 1056 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 MARSP56192 900 aaKnown RBP19.42■□□□□ 0.7
SNX2-213ENST00000514949 FKBP3Q00688 224 aaKnown RBP19.42■□□□□ 0.7
SNX2-213ENST00000514949 PICALMQ13492 652 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 ECM1Q16610 540 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 MUM1L1Q5H9M0 696 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 SLC27A3Q5K4L6 730 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 IQCEQ6IPM2 695 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 C2CD5Q86YS7 1000 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 SYN2Q92777 582 aaPredicted RBP19.42■□□□□ 0.7
SNX2-213ENST00000514949 IFIH1Q9BYX4 1025 aaKnown RBP19.42■□□□□ 0.7
SNX2-213ENST00000514949 SNX12Q9UMY4 172 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 TACC1O75410 805 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 PLEKP08567 350 aaPredicted RBP19.42■□□□□ 0.7
SNX2-213ENST00000514949 IDEP14735 1019 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 FAM71BQ8TC56 605 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 RUBCNQ92622 972 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 CCDC17Q96LX7 622 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 CEP63Q96MT8 703 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 NUCKS1Q9H1E3 243 aaKnown RBP19.42■□□□□ 0.7
SNX2-213ENST00000514949 PSTPIP2Q9H939 334 aa19.42■□□□□ 0.7
SNX2-213ENST00000514949 FAM207AQ9NSI2 230 aaPredicted RBP19.42■□□□□ 0.7
SNX2-213ENST00000514949 CYP3A7-CYP3A51PA0A087WV96 503 aa19.41■□□□□ 0.7
SNX2-213ENST00000514949 PPEF1O14829 653 aaPredicted RBP19.41■□□□□ 0.7
SNX2-213ENST00000514949 CYP3A7P24462 503 aa19.41■□□□□ 0.7
SNX2-213ENST00000514949 COASYQ13057 564 aa19.41■□□□□ 0.7
SNX2-213ENST00000514949 UBE2SQ16763 222 aa19.41■□□□□ 0.7
SNX2-213ENST00000514949 KRT26Q7Z3Y9 468 aa19.41■□□□□ 0.7
SNX2-213ENST00000514949 CREG2Q8IUH2 290 aa19.41■□□□□ 0.7
SNX2-213ENST00000514949 MBOAT7Q96N66 472 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms