RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 NSUN4Q96CB9 384 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 BRIP1Q9BX63 1249 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 RNF41Q9H4P4 317 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 NARFQ9UHQ1 456 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 UNCXA6NJT0 531 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 DEXIO95424 95 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 TBC1D8O95759 1140 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 PARP1P09874 1014 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 FOSL1P15407 271 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 TM4SF1P30408 202 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 PDE4BQ07343 736 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 NR5A1Q13285 461 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 VPS72Q15906 364 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 MAP7D1Q3KQU3 841 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 BICDL1Q6ZP65 573 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 NEK10Q6ZWH5 1172 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 ENOX1Q8TC92 643 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 OXER1Q8TDS5 423 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 VMP1Q96GC9 406 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 NAT10Q9H0A0 1025 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 TAOK3Q9H2K8 898 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 FOXP1Q9H334 677 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 AATFQ9NY61 560 aaKnown RBP eCLIP8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 SWAP70Q9UH65 585 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 KLF15Q9UIH9 416 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 FBXO2Q9UK22 296 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 PRELID1Q9Y255 219 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 ZNF510Q9Y2H8 683 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 FAM169AQ9Y6X4 670 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 MYH1P12882 1939 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 MINDY4BA8MYZ0 360 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 MYO1FO00160 1098 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 PPP1R12BO60237 982 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 CUTAO60888 179 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 ENPP1P22413 925 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 MDM2Q00987 491 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 PNOCQ13519 176 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 PTPN21Q16825 1174 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 ATP6V0A4Q9HBG4 840 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 LTBP1Q14766 1721 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 H3BQF6 201 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 GNAT1P11488 350 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 BMP6P22004 513 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 ZNF132P52740 706 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 TRIM29Q14134 588 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 RC3H1Q5TC82 1133 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 CEP112Q8N8E3 955 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 SMYD1Q8NB12 490 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 WASF1Q92558 559 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 UBXN4Q92575 508 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 DTNBP1Q96EV8 351 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 PCDHB6Q9Y5E3 794 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 FOXN1O15353 648 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 RPS6KA4O75676 772 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 LDHAP00338 332 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 ATICP31939 592 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 SH3BGRP55822 239 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 MAP3K9P80192 1104 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 TROAPQ12815 778 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 CAVIN4Q5BKX8 364 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 EARS2Q5JPH6 523 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 AGAP9Q5VTM2 703 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 CC2D1AQ6P1N0 951 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 TXNRD3Q86VQ6 643 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 SLC7A5P1Q8MH63 180 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 PDILTQ8N807 584 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 MAB21L3Q8N8X9 362 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 ESR2Q92731 530 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 ZSCAN10Q96SZ4 725 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 TSC22D3Q99576 134 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 RNF26Q9BY78 433 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 OSBPL5Q9H0X9 879 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 SLC39A2Q9NP94 309 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 AASDHPPTQ9NRN7 309 aa8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 MAP3K20Q9NYL2 800 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 PPP1R1BQ9UD71 204 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 DDX20Q9UHI6 824 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-219ENST00000514743 A0A1B0GVG6 124 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 FAM205CA6NFA0 338 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 IKBKBO14920 756 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 TRIM37O94972 964 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 ABL1P00519 1130 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 FERP16591 822 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 PTPREP23469 700 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 PDE4DQ08499 809 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 GNL2Q13823 731 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 NPY5RQ15761 445 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 SPECC1Q5M775 1068 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 UIMC1Q96RL1 719 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 XPO4Q9C0E2 1151 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 LRRC37AA6NMS7 1700 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 ERICH2A1L162 156 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 WNT7AO00755 349 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 PRDM1O75626 825 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 PLEKHA8P1O95397 391 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 HOXD10P28358 340 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 RPS8P62241 208 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 PABPC4Q13310 644 aaKnown RBP eCLIP8.24□□□□□ -1.093e-8■□□□□ 9.8
PDLIM5-219ENST00000514743 TLDC1Q6P9B6 456 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms