RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	TRIM27	P14373	513 aa		8.19	□□□□□ -1.1
HIPK1-210	ENST00000514621	CASP7	P55210	303 aa		8.19	□□□□□ -1.1
HIPK1-210	ENST00000514621	SEPT6	Q14141	434 aa		8.19	□□□□□ -1.1
HIPK1-210	ENST00000514621	SF3B3	Q15393	1217 aa	Known RBP	8.19	□□□□□ -1.1
HIPK1-210	ENST00000514621	WIPI1	Q5MNZ9	446 aa	Predicted RBP	8.19	□□□□□ -1.1
HIPK1-210	ENST00000514621	ATF7IP	Q6VMQ6	1270 aa		8.19	□□□□□ -1.1
HIPK1-210	ENST00000514621	PANK1	Q8TE04	598 aa		8.19	□□□□□ -1.1
HIPK1-210	ENST00000514621	RPGR	Q92834	1020 aa	Known RBP	8.19	□□□□□ -1.1
HIPK1-210	ENST00000514621	RBM17	Q96I25	401 aa	Known RBP	8.19	□□□□□ -1.1
HIPK1-210	ENST00000514621	CRAMP1	Q96RY5	1269 aa		8.19	□□□□□ -1.1
HIPK1-210	ENST00000514621	PCDHB5	Q9Y5E4	795 aa		8.19	□□□□□ -1.1
HIPK1-210	ENST00000514621	COL11A2	P13942	1736 aa	Predicted RBP	8.19	□□□□□ -1.1
HIPK1-210	ENST00000514621	GRM8	O00222	908 aa		8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	GRIN3B	O60391	1043 aa		8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	PDE8A	O60658	829 aa		8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	LEFTY1	O75610	366 aa		8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	HSP90B1	P14625	803 aa	Known RBP	8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	ALDH1B1	P30837	517 aa		8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	CCT4	P50991	539 aa	Known RBP	8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	ZKSCAN2	Q63HK3	967 aa		8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	FTSJ3	Q8IY81	847 aa	Known RBP	8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	ABI1	Q8IZP0	508 aa		8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	TOP6BL	Q8N6T0	577 aa		8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	EXOC6	Q8TAG9	804 aa		8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	PLA2G12B	Q9BX93	195 aa		8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	WNT10A	Q9GZT5	417 aa		8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	C9orf78	Q9NZ63	289 aa	Predicted RBP	8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	ABCC4	O15439	1325 aa		8.18	□□□□□ -1.1
HIPK1-210	ENST00000514621	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	NBPF7	P0C2Y1	421 aa	Predicted RBP	8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	TFE3	P19532	575 aa	Predicted RBP	8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	CTSW	P56202	376 aa		8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	ETF1	P62495	437 aa	Known RBP	8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	INTS3	Q68E01	1043 aa	Known RBP	8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	ARHGAP27	Q6ZUM4	889 aa		8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	DDX46	Q7L014	1031 aa	Known RBP	8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	TTLL11	Q8NHH1	800 aa		8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	GIPC2	Q8TF65	315 aa		8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	USP44	Q9H0E7	712 aa		8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	PRDM10	Q9NQV6	1147 aa		8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	TACC3	Q9Y6A5	838 aa		8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	UTY	O14607	1347 aa		8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	GOLGB1	Q14789	3259 aa	Known RBP	8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	UTRN	P46939	3433 aa		8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	DDX60	Q8IY21	1712 aa	Known RBP	8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	DLEC1	Q9Y238	1755 aa		8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	BRCA1	P38398	1863 aa	Known RBP	8.17	□□□□□ -1.1
HIPK1-210	ENST00000514621	BBOX1	O75936	387 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	LRIG2	O94898	1065 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	CSF1R	P07333	972 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	FOXO4	P98177	505 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	GRAP	Q13588	217 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	TSNAXIP1	Q2TAA8	658 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	CCDC152	Q4G0S7	254 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	EPHA10	Q5JZY3	1008 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	OLFM4	Q6UX06	510 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	GRAPL	Q8TC17	118 aa	Predicted RBP	8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	CELF1	Q92879	486 aa	Known RBP	8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	KAZALD1	Q96I82	304 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	FBXL18	Q96ME1	805 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	MKNK2	Q9HBH9	465 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	ADGRE2	Q9UHX3	823 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	TLR6	Q9Y2C9	796 aa		8.16	□□□□□ -1.1
HIPK1-210	ENST00000514621	SLX4	Q8IY92	1834 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	GFRA2	O00451	464 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	PWP1	Q13610	501 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	ARMCX6	Q7L4S7	300 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	UBE3D	Q7Z6J8	389 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	CCDC84	Q86UT8	332 aa	Predicted RBP	8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	RELL1	Q8IUW5	271 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	HID1	Q8IV36	788 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	ITPRIP	Q8IWB1	547 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	STK11IP	Q8N1F8	1099 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	TMEM57	Q8N5G2	664 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	PHC3	Q8NDX5	983 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	NETO1	Q8TDF5	533 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	SUCLG2	Q96I99	432 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	GREM2	Q9H772	168 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	GTF2IRD1	Q9UHL9	959 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	ATP6V0A2	Q9Y487	856 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621		U3KQE9	123 aa		8.15	□□□□□ -1.1
HIPK1-210	ENST00000514621	LAMB2	P55268	1798 aa		8.15	□□□□□ -1.11
HIPK1-210	ENST00000514621	RTL9	Q8NET4	1388 aa		8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	KRTAP9-6	A0A140TA67	174 aa		8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	TAL1	P17542	331 aa	Predicted RBP	8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	CDK8	P49336	464 aa		8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	RPS8	P62241	208 aa	Known RBP	8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	SOGA3	Q5TF21	947 aa		8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	LMBR1L	Q6UX01	489 aa		8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	SP8	Q8IXZ3	490 aa		8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	ANKRD44	Q8N8A2	993 aa		8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	FAM181A	Q8N9Y4	354 aa		8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	FLCN	Q8NFG4	579 aa		8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	MISP3	Q96FF7	219 aa		8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	MEIS3	Q99687	375 aa		8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	RSRP1	Q9BUV0	290 aa		8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	FOXQ1	Q9C009	403 aa		8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	PAK6	Q9NQU5	681 aa	Predicted RBP	8.14	□□□□□ -1.11
HIPK1-210	ENST00000514621	COL4A1	P02462	1669 aa		8.14	□□□□□ -1.11

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms