RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 FAM126BQ8IXS8 530 aa21.83■■□□□ 1.09
LPCAT1-206ENST00000514484 GPKOWQ92917 476 aaPredicted RBP eCLIP21.83■■□□□ 1.09
LPCAT1-206ENST00000514484 LRCH3Q96II8 777 aa21.83■■□□□ 1.09
LPCAT1-206ENST00000514484 TOX2Q96NM4 488 aa21.83■■□□□ 1.09
LPCAT1-206ENST00000514484 GOLGA8AA7E2F4 631 aa21.82■■□□□ 1.08
LPCAT1-206ENST00000514484 GOLGA8BA8MQT2 603 aa21.82■■□□□ 1.08
LPCAT1-206ENST00000514484 CABYRO75952 493 aa21.82■■□□□ 1.08
LPCAT1-206ENST00000514484 RGS20O76081 388 aa21.82■■□□□ 1.08
LPCAT1-206ENST00000514484 RAG1P15918 1043 aa21.82■■□□□ 1.08
LPCAT1-206ENST00000514484 ARHGAP1Q07960 439 aa21.82■■□□□ 1.08
LPCAT1-206ENST00000514484 APOBRQ0VD83 1088 aa21.82■■□□□ 1.08
LPCAT1-206ENST00000514484 USP17L6PQ6QN14 398 aa21.82■■□□□ 1.08
LPCAT1-206ENST00000514484 BLOC1S2Q6QNY1 142 aa21.82■■□□□ 1.08
LPCAT1-206ENST00000514484 Q6ZUG5 572 aa21.82■■□□□ 1.08
LPCAT1-206ENST00000514484 SAMD3Q8N6K7 520 aa21.82■■□□□ 1.08
LPCAT1-206ENST00000514484 TBX21Q9UL17 535 aa21.82■■□□□ 1.08
LPCAT1-206ENST00000514484 MRVI1Q9Y6F6 885 aa21.82■■□□□ 1.08
LPCAT1-206ENST00000514484 SORBS3O60504 671 aa21.81■■□□□ 1.08
LPCAT1-206ENST00000514484 EIF3JO75822 258 aaKnown RBP21.81■■□□□ 1.08
LPCAT1-206ENST00000514484 CASTP20810 708 aaKnown RBP21.81■■□□□ 1.08
LPCAT1-206ENST00000514484 CCND2P30279 289 aa21.81■■□□□ 1.08
LPCAT1-206ENST00000514484 HEATR3Q7Z4Q2 680 aa21.81■■□□□ 1.08
LPCAT1-206ENST00000514484 SLC43A3Q8NBI5 491 aa21.81■■□□□ 1.08
LPCAT1-206ENST00000514484 AFG1LQ8WV93 481 aa21.81■■□□□ 1.08
LPCAT1-206ENST00000514484 POLR3EQ9NVU0 708 aa21.81■■□□□ 1.08
LPCAT1-206ENST00000514484 RBM28Q9NW13 759 aaKnown RBP21.81■■□□□ 1.08
LPCAT1-206ENST00000514484 GH1P01241 217 aa21.8■■□□□ 1.08
LPCAT1-206ENST00000514484 RPS6KB1P23443 525 aa21.8■■□□□ 1.08
LPCAT1-206ENST00000514484 CDC27P30260 824 aa21.8■■□□□ 1.08
LPCAT1-206ENST00000514484 SMARCC2Q8TAQ2 1214 aa21.8■■□□□ 1.08
LPCAT1-206ENST00000514484 BRF1Q92994 677 aa21.8■■□□□ 1.08
LPCAT1-206ENST00000514484 CUL5Q93034 780 aa21.8■■□□□ 1.08
LPCAT1-206ENST00000514484 PPP1R12CQ9BZL4 782 aa21.8■■□□□ 1.08
LPCAT1-206ENST00000514484 FAM217BQ9NTX9 383 aaPredicted RBP21.8■■□□□ 1.08
LPCAT1-206ENST00000514484 DDX41Q9UJV9 622 aaKnown RBP21.8■■□□□ 1.08
LPCAT1-206ENST00000514484 FRMPD4Q14CM0 1322 aa21.8■■□□□ 1.08
LPCAT1-206ENST00000514484 A6NJR5 290 aa21.79■■□□□ 1.08
LPCAT1-206ENST00000514484 MEIS2O14770 477 aa21.79■■□□□ 1.08
LPCAT1-206ENST00000514484 TLR3O15455 904 aaKnown RBP21.79■■□□□ 1.08
LPCAT1-206ENST00000514484 B4GALT4O60513 344 aa21.79■■□□□ 1.08
LPCAT1-206ENST00000514484 CD4P01730 458 aa21.79■■□□□ 1.08
LPCAT1-206ENST00000514484 MMP3P08254 477 aa21.79■■□□□ 1.08
LPCAT1-206ENST00000514484 FUT2Q10981 343 aa21.79■■□□□ 1.08
LPCAT1-206ENST00000514484 UBE2SQ16763 222 aa21.79■■□□□ 1.08
LPCAT1-206ENST00000514484 BRDTQ58F21 947 aaPredicted RBP21.79■■□□□ 1.08
LPCAT1-206ENST00000514484 C9orf50Q5SZB4 431 aa21.79■■□□□ 1.08
LPCAT1-206ENST00000514484 VSIG10LQ86VR7 867 aa21.79■■□□□ 1.08
LPCAT1-206ENST00000514484 MTG1Q9BT17 334 aaPredicted RBP21.79■■□□□ 1.08
LPCAT1-206ENST00000514484 TRPV6Q9H1D0 765 aa21.79■■□□□ 1.08
LPCAT1-206ENST00000514484 EPHB4P54760 987 aa21.78■■□□□ 1.08
LPCAT1-206ENST00000514484 CHMP4BP1P59074 171 aa21.78■■□□□ 1.08
LPCAT1-206ENST00000514484 WWC2Q6AWC2 1192 aa21.78■■□□□ 1.08
LPCAT1-206ENST00000514484 USP26Q9BXU7 913 aa21.78■■□□□ 1.08
LPCAT1-206ENST00000514484 TRIP12Q14669 1992 aaPredicted RBP21.78■■□□□ 1.08
LPCAT1-206ENST00000514484 METAP2P50579 478 aaKnown RBP eCLIP21.77■■□□□ 1.08
LPCAT1-206ENST00000514484 MRPS9P82933 396 aaKnown RBP21.77■■□□□ 1.08
LPCAT1-206ENST00000514484 SHHQ15465 462 aa21.77■■□□□ 1.08
LPCAT1-206ENST00000514484 FAM47CQ5HY64 1035 aa21.77■■□□□ 1.08
LPCAT1-206ENST00000514484 PSTPIP2Q9H939 334 aa21.77■■□□□ 1.08
LPCAT1-206ENST00000514484 SCN5AQ14524 2016 aa21.77■■□□□ 1.07
LPCAT1-206ENST00000514484 PIK3CDO00329 1044 aa21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 TIMP1P01033 207 aa21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 UBA1P22314 1058 aaKnown RBP21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 PSMA5P28066 241 aa21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 ADD1P35611 737 aaKnown RBP21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 FPGSQ05932 587 aa21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 NBPF20Q3BBV1 942 aa21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 LRIT3Q3SXY7 679 aa21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 TYW1BQ6NUM6 668 aa21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 ALDH8A1Q9H2A2 487 aaPredicted RBP21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 TRMT13Q9NUP7 481 aaKnown RBP21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 RTEL1Q9NZ71 1219 aa21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 V9GY48 417 aaPredicted RBP21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 UMODL1Q5DID0 1318 aa21.76■■□□□ 1.07
LPCAT1-206ENST00000514484 GGPS1O95749 300 aa21.75■■□□□ 1.07
LPCAT1-206ENST00000514484 ZNF286BP0CG31 522 aa21.75■■□□□ 1.07
LPCAT1-206ENST00000514484 CYP2C18P33260 490 aa21.75■■□□□ 1.07
LPCAT1-206ENST00000514484 NAPAP54920 295 aa21.75■■□□□ 1.07
LPCAT1-206ENST00000514484 SP2Q02086 613 aa21.75■■□□□ 1.07
LPCAT1-206ENST00000514484 DHX37Q8IY37 1157 aaKnown RBP21.75■■□□□ 1.07
LPCAT1-206ENST00000514484 TANC1Q9C0D5 1861 aa21.75■■□□□ 1.07
LPCAT1-206ENST00000514484 KPNA6O60684 536 aa21.74■■□□□ 1.07
LPCAT1-206ENST00000514484 RCAN1P53805 252 aa21.74■■□□□ 1.07
LPCAT1-206ENST00000514484 EMID1Q96A84 441 aaPredicted RBP21.74■■□□□ 1.07
LPCAT1-206ENST00000514484 AGXT2Q9BYV1 514 aa21.74■■□□□ 1.07
LPCAT1-206ENST00000514484 UPF3BQ9BZI7 483 aaKnown RBP21.74■■□□□ 1.07
LPCAT1-206ENST00000514484 HIPK3Q9H422 1215 aa21.74■■□□□ 1.07
LPCAT1-206ENST00000514484 BCAS3Q9H6U6 928 aa21.74■■□□□ 1.07
LPCAT1-206ENST00000514484 NID2Q14112 1375 aa21.74■■□□□ 1.07
LPCAT1-206ENST00000514484 EPB41L2O43491 1005 aaKnown RBP21.73■■□□□ 1.07
LPCAT1-206ENST00000514484 PPFIA3O75145 1194 aa21.73■■□□□ 1.07
LPCAT1-206ENST00000514484 CYP2C9P11712 490 aa21.73■■□□□ 1.07
LPCAT1-206ENST00000514484 SEMA3FQ13275 785 aa21.73■■□□□ 1.07
LPCAT1-206ENST00000514484 CELF3Q5SZQ8 465 aaKnown RBP21.73■■□□□ 1.07
LPCAT1-206ENST00000514484 MYSM1Q5VVJ2 828 aa21.73■■□□□ 1.07
LPCAT1-206ENST00000514484 PCNX4Q63HM2 1172 aa21.73■■□□□ 1.07
LPCAT1-206ENST00000514484 MFSD5Q6N075 450 aa21.73■■□□□ 1.07
LPCAT1-206ENST00000514484 RUFY3Q7L099 469 aa21.73■■□□□ 1.07
LPCAT1-206ENST00000514484 PPTC7Q8NI37 304 aa21.73■■□□□ 1.07
LPCAT1-206ENST00000514484 SPATA33Q96N06 139 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms