RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 IQCKQ8N0W5 287 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 CFHR5Q9BXR6 569 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 GLIS2Q9BZE0 524 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-205ENST00000514271 CNNM2Q9H8M5 875 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 SAGE1Q9NXZ1 904 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 SLC4A4Q9Y6R1 1079 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 LOXHD1Q8IVV2 1947 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 POLR3DP05423 398 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-205ENST00000514271 ASNSP08243 561 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 PABPC4Q13310 644 aaKnown RBP eCLIP8.29□□□□□ -1.08
CLIP1-205ENST00000514271 SPATA1Q5VX52 437 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 MAP1SQ66K74 1059 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-205ENST00000514271 OTUD7BQ6GQQ9 843 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 RGMBQ6NW40 437 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 TATDN1Q6P1N9 297 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.29□□□□□ -1.08
CLIP1-205ENST00000514271 FAXDC2Q96IV6 333 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 AIFM3Q96NN9 605 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 MAF1Q9H063 256 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 PUS7LQ9H0K6 701 aaKnown RBP8.29□□□□□ -1.08
CLIP1-205ENST00000514271 EPB41L4AQ9HCS5 686 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-205ENST00000514271 DCP1AQ9NPI6 582 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-205ENST00000514271 SAMSN1Q9NSI8 373 aaKnown RBP8.29□□□□□ -1.08
CLIP1-205ENST00000514271 SERPINB13Q9UIV8 391 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 PNMA2Q9UL42 364 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 A0A087WUV0 522 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-205ENST00000514271 PJA2O43164 708 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 SLC10A3P09131 477 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 IFNAR1P17181 557 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 NNTQ13423 1086 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 C12orf60Q5U649 245 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 RCSD1Q6JBY9 416 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 CNNM4Q6P4Q7 775 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 C16orf86Q6ZW13 317 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 ERO1BQ86YB8 467 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 SCYL3Q8IZE3 742 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 CSRNP1Q96S65 589 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 WDR18Q9BV38 432 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 PHF20Q9BVI0 1012 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 LRRC2Q9BYS8 371 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 GDF3Q9NR23 364 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 DONSONQ9NYP3 566 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 PHIPQ8WWQ0 1821 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 A0A1W2PQJ5 194 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 CLRN2A0PK11 232 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 TCP10L2B9ZVM9 353 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 ORC4O43929 436 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 IRAK1P51617 712 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 MCCD1P59942 119 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-205ENST00000514271 POSTNQ15063 836 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 ZC3H3Q8IXZ2 948 aaKnown RBP8.28□□□□□ -1.08
CLIP1-205ENST00000514271 CRACR2BQ8N4Y2 399 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-205ENST00000514271 KLRG1Q96E93 195 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 NAPBQ9H115 298 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 ANO9A1A5B4 782 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 SPDYE5A6NIY4 337 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 C19orf81C9J6K1 198 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 ADM5C9JUS6 153 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 IRF6O14896 467 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 EIF3HO15372 352 aaKnown RBP eCLIP8.28□□□□□ -1.08
CLIP1-205ENST00000514271 EARS2Q5JPH6 523 aaKnown RBP8.28□□□□□ -1.08
CLIP1-205ENST00000514271 KRT40Q6A162 431 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 TGFBRAP1Q8WUH2 860 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 CHMP4CQ96CF2 233 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 PICK1Q9NRD5 415 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 JAG2Q9Y219 1238 aa8.28□□□□□ -1.08
CLIP1-205ENST00000514271 SHTN1A0MZ66 631 aa8.27□□□□□ -1.08
CLIP1-205ENST00000514271 ALADP13716 330 aa8.27□□□□□ -1.08
CLIP1-205ENST00000514271 GTF2A2P52657 109 aa8.27□□□□□ -1.08
CLIP1-205ENST00000514271 ADKP55263 362 aaKnown RBP8.27□□□□□ -1.08
CLIP1-205ENST00000514271 GABPAQ06546 454 aa8.27□□□□□ -1.08
CLIP1-205ENST00000514271 DEFB115Q30KQ5 88 aa8.27□□□□□ -1.08
CLIP1-205ENST00000514271 LACTB2Q53H82 288 aaPredicted RBP8.27□□□□□ -1.08
CLIP1-205ENST00000514271 MIIPQ5JXC2 388 aa8.27□□□□□ -1.08
CLIP1-205ENST00000514271 MCTP2Q6DN12 878 aa8.27□□□□□ -1.08
CLIP1-205ENST00000514271 LCORLQ8N3X6 602 aa8.27□□□□□ -1.08
CLIP1-205ENST00000514271 CNNM3Q8NE01 707 aa8.27□□□□□ -1.08
CLIP1-205ENST00000514271 PPM1EQ8WY54 764 aa8.27□□□□□ -1.08
CLIP1-205ENST00000514271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.27□□□□□ -1.08
CLIP1-205ENST00000514271 KCNH3Q9ULD8 1083 aa8.27□□□□□ -1.08
CLIP1-205ENST00000514271 GUCY1A2P33402 732 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 SYKP43405 635 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 TDO2P48775 406 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 EHHADHQ08426 723 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 IMMTQ16891 758 aaKnown RBP8.27□□□□□ -1.09
CLIP1-205ENST00000514271 TMEM179Q6ZVK1 233 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 FASTKD5Q7L8L6 764 aaKnown RBP8.27□□□□□ -1.09
CLIP1-205ENST00000514271 SAPCD2Q86UD0 394 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 IFNL3Q8IZI9 196 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 TCP11L1Q9NUJ3 509 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 DOCK5Q9H7D0 1870 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 USP2O75604 605 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-205ENST00000514271 SMC2O95347 1197 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 EGFRP00533 1210 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 NAALADL2Q58DX5 795 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 NOSTRINQ8IVI9 506 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 C3orf20Q8ND61 904 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 CCDC34Q96HJ3 373 aa8.27□□□□□ -1.09
CLIP1-205ENST00000514271 MMS19Q96T76 1030 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms