RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 CISD2Q8N5K1 135 aaKnown RBP6.05□□□□□ -1.44
NIPBL-207ENST00000513819 FBXW5Q969U6 566 aa6.05□□□□□ -1.44
NIPBL-207ENST00000513819 TMEM169Q96HH4 297 aa6.05□□□□□ -1.44
NIPBL-207ENST00000513819 CELF4Q9BZC1 486 aaKnown RBP6.05□□□□□ -1.44
NIPBL-207ENST00000513819 IMPACTQ9P2X3 320 aa6.05□□□□□ -1.44
NIPBL-207ENST00000513819 A0A1W2PQ45 241 aaPredicted RBP6.04□□□□□ -1.44
NIPBL-207ENST00000513819 A0A1W2PQY0 241 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 ZNF891A8MT65 544 aaPredicted RBP6.04□□□□□ -1.44
NIPBL-207ENST00000513819 CBX4O00257 560 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 EYA4O95677 639 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 FUCA1P04066 466 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 ST5P78524 1137 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 DHCR24Q15392 516 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 SLC14A2Q15849 920 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 TMEM177Q53S58 311 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 FAM47CQ5HY64 1035 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 WWC2Q6AWC2 1192 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 LHFPL2Q6ZUX7 228 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 TRMT2BQ96GJ1 504 aaKnown RBP6.04□□□□□ -1.44
NIPBL-207ENST00000513819 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.04□□□□□ -1.44
NIPBL-207ENST00000513819 PAK6Q9NQU5 681 aaPredicted RBP6.04□□□□□ -1.44
NIPBL-207ENST00000513819 HOMER2Q9NSB8 354 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 CATSPERZQ9NTU4 200 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 CBLCQ9ULV8 474 aa6.04□□□□□ -1.44
NIPBL-207ENST00000513819 C22orf46C9J442 243 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 H7BY64 318 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 TRAF5O00463 557 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 WNT9AO14904 365 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 MSL3P1P0C860 447 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 COL6A2P12110 1019 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 FUT4P22083 530 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 TACR1P25103 407 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 ID4P47928 161 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 ERVFC1P60507 584 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 C16orf59Q7L2K0 433 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 OVCH1Q7RTY7 1134 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 ANKS4BQ8N8V4 417 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 OR2W6PQ8NHA6 318 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 PI4K2BQ8TCG2 481 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 USP7Q93009 1102 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 PLCD4Q9BRC7 762 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 MTA3Q9BTC8 594 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 FBLN5Q9UBX5 448 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 ANGEL1Q9UNK9 670 aaKnown RBP6.03□□□□□ -1.44
NIPBL-207ENST00000513819 TAF6LQ9Y6J9 622 aa6.03□□□□□ -1.44
NIPBL-207ENST00000513819 A0A1W2PQ27 194 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 A0A1W2PQ64 194 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 A0A1W2PQC6 194 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 A0A1W2PQD8 194 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 NOTOA8MTQ0 251 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 KIAA1324LA8MWY0 1029 aaPredicted RBP6.02□□□□□ -1.45
NIPBL-207ENST00000513819 EFEMP2O95967 443 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 PDGFRBP09619 1106 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 CPEP16870 476 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 SCNN1BP51168 640 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 MVKQ03426 396 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 STAT4Q14765 748 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 PLEKHG6Q3KR16 790 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 SLC23A3Q6PIS1 610 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 FERMT3Q86UX7 667 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 ANKLE2Q86XL3 938 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 Q8N1Y9 231 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 LZTR1Q8N653 840 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 CHST14Q8NCH0 376 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 PDZD8Q8NEN9 1154 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 NUP43Q8NFH3 380 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 PLEKHO2Q8TD55 490 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 USP33Q8TEY7 942 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 ASIC4Q96FT7 647 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 ORAI3Q9BRQ5 295 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 CABP5Q9NP86 173 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 C19orf73Q9NVV2 129 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 ADAMTS6Q9UKP5 1117 aa6.02□□□□□ -1.45
NIPBL-207ENST00000513819 NEMP1O14524 444 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 KCNK3O14649 394 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 GSTA4O15217 222 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 NRDCO43847 1150 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 PSPNO60542 156 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 ADAMTS4O75173 837 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 F2P00734 622 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 GNAT1P11488 350 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 PDE6AP16499 860 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 BPIP17213 487 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 PRKCAP17252 672 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 KRT15P19012 456 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 TRHRP34981 398 aaPredicted RBP6.01□□□□□ -1.45
NIPBL-207ENST00000513819 GALK1P51570 392 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 MECP2P51608 486 aaKnown RBP6.01□□□□□ -1.45
NIPBL-207ENST00000513819 DSG1Q02413 1049 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 CHRNEQ04844 493 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 PLCL1Q15111 1095 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 CRY1Q16526 586 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 TIGD5Q53EQ6 642 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 GALNT18Q6P9A2 607 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 OSTM1Q86WC4 334 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 KIF18BQ86Y91 864 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 SPPL2CQ8IUH8 684 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 C2orf69Q8N8R5 385 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 NLGN2Q8NFZ4 835 aa6.01□□□□□ -1.45
NIPBL-207ENST00000513819 WDR66Q8TBY9 1149 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms