RNA–Protein interactions for RNA: ENST00000513418.1

SMAD5-208, Transcript of SMAD family member 5, human

TSL 5

Gene SMAD5, Length 523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMAD5-208	ENST00000513418	ZC3H12D	A2A288	527 aa	Known RBP	4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	C22orf46	C9J442	243 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	SGSM2	O43147	1006 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	PAX4	O43316	350 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	SOD2	P04179	222 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	DBH	P09172	617 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	MYCLP1	P12525	358 aa	Predicted RBP	4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	ITGB5	P18084	799 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	KIR2DL1	P43626	348 aa	Predicted RBP	4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	KIR2DL2	P43627	348 aa	Predicted RBP	4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	GUCY1A3	Q02108	690 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	HABP4	Q5JVS0	413 aa	Known RBP	4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	E4F1	Q66K89	784 aa	Predicted RBP	4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	CNNM4	Q6P4Q7	775 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	CEP68	Q76N32	757 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	OVCH1	Q7RTY7	1134 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	LRRTM3	Q86VH5	581 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	IRF2BP1	Q8IU81	584 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	IGSF22	Q8N9C0	903 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	VTA1	Q9NP79	307 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	IFT57	Q9NWB7	429 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	CLDND1	Q9NY35	253 aa		4.23	□□□□□ -1.73
SMAD5-208	ENST00000513418	MYOCOS	A0A1B0GUC4	107 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	RASSF10	A6NK89	507 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	NUDT19	A8MXV4	375 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	ZNF561-AS1	K7EIQ3	104 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	MAN2B1	O00754	1011 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	PDE8A	O60658	829 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	RFPL3	O75679	317 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	TBC1D8	O95759	1140 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	JMJD7	P0C870	316 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	PDE6A	P16499	860 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	FBLN1	P23142	703 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	GRK2	P25098	689 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	GRK3	P35626	688 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	MC3R	P41968	323 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	GABRE	P78334	506 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	KCNAB2	Q13303	367 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	RTP5	Q14D33	572 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	NR0B2	Q15466	257 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	TCEA2	Q15560	299 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	FNDC3B	Q53EP0	1204 aa	Known RBP	4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	LCE1D	Q5T752	114 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	HLA-DQA1	Q5Y7H0	255 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	CPZ	Q66K79	652 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	CYP2R1	Q6VVX0	501 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	RPTN	Q6XPR3	784 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	PRR23B	Q6ZRT6	265 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	OSTM1	Q86WC4	334 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	FAM26E	Q8N5C1	309 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	ANKS4B	Q8N8V4	417 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	ARRDC4	Q8NCT1	418 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	AGBL5	Q8NDL9	886 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	STAG1	Q8WVM7	1258 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	MYLIP	Q8WY64	445 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	MFSD3	Q96ES6	412 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	IPO9	Q96P70	1041 aa	Known RBP	4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	TRIM8	Q9BZR9	551 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	CRTAC1	Q9NQ79	661 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	KLHL14	Q9P2G3	628 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418		X6R8D5	127 aa		4.22	□□□□□ -1.73
SMAD5-208	ENST00000513418	CCDC163	A0A0D9SF12	145 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418		A0A1W2PQ45	241 aa	Predicted RBP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418		A0A1W2PQY0	241 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	CCDC66	A2RUB6	948 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418		M0R2C6	588 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	ACOT7	O00154	380 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	VIL1	P09327	827 aa	Known RBP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	ZBTB48	P10074	688 aa	Predicted RBP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	DNM2	P50570	870 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	NCKAP1L	P55160	1127 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	PHF19	Q5T6S3	580 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	PIK3R6	Q5UE93	754 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	FILIP1	Q7Z7B0	1213 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	MTDH	Q86UE4	582 aa	Known RBP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	PTRH1	Q86Y79	214 aa	Known RBP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	NOSTRIN	Q8IVI9	506 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	CMIP	Q8IY22	773 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	IFNL3	Q8IZI9	196 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	AFAP1L2	Q8N4X5	818 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	CLEC4D	Q8WXI8	215 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	DDX1	Q92499	740 aa	Known RBP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	SYTL4	Q96C24	671 aa	Predicted RBP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	SGPP1	Q9BX95	441 aa		4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	YBX2	Q9Y2T7	364 aa	Known RBP	4.21	□□□□□ -1.74
SMAD5-208	ENST00000513418	FITM1	A5D6W6	292 aa		4.2	□□□□□ -1.74
SMAD5-208	ENST00000513418	FAM90A27P	A6NNH2	459 aa		4.2	□□□□□ -1.74
SMAD5-208	ENST00000513418	WNT9A	O14904	365 aa		4.2	□□□□□ -1.74
SMAD5-208	ENST00000513418	SLC27A2	O14975	620 aa		4.2	□□□□□ -1.74
SMAD5-208	ENST00000513418	EYA4	O95677	639 aa		4.2	□□□□□ -1.74
SMAD5-208	ENST00000513418	KRT1	P04264	644 aa		4.2	□□□□□ -1.74
SMAD5-208	ENST00000513418	KRT15	P19012	456 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms