RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 KRT85P78386 507 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 MAP2K5Q13163 448 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 ORC2Q13416 577 aaPredicted RBP14.25□□□□□ -0.13
PDPN-210ENST00000513143 ANO1Q5XXA6 986 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 ZNF467Q7Z7K2 595 aaPredicted RBP14.25□□□□□ -0.13
PDPN-210ENST00000513143 DPP9Q86TI2 863 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 IL31RAQ8NI17 732 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 MORC4Q8TE76 937 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 SOCS4Q8WXH5 440 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 MBOAT7Q96N66 472 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 NUDT12Q9BQG2 462 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 POLR3EQ9NVU0 708 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 SLC5A4Q9NY91 659 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 RTEL1Q9NZ71 1219 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 TFIP11Q9UBB9 837 aaKnown RBP14.25□□□□□ -0.13
PDPN-210ENST00000513143 CFAP45Q9UL16 551 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 CLIC4Q9Y696 253 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 KIAA1217Q5T5P2 1943 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 B4DLN1 442 aa14.24□□□□□ -0.13
PDPN-210ENST00000513143 CCNT1O60563 726 aaKnown RBP14.24□□□□□ -0.13
PDPN-210ENST00000513143 FKTNO75072 461 aa14.24□□□□□ -0.13
PDPN-210ENST00000513143 TDP2O95551 362 aa14.24□□□□□ -0.13
PDPN-210ENST00000513143 HOXC6P09630 235 aa14.24□□□□□ -0.13
PDPN-210ENST00000513143 CCND2P30279 289 aa14.24□□□□□ -0.13
PDPN-210ENST00000513143 NASPP49321 788 aaPredicted RBP14.24□□□□□ -0.13
PDPN-210ENST00000513143 MRPS9P82933 396 aaKnown RBP14.24□□□□□ -0.13
PDPN-210ENST00000513143 CAP1Q01518 475 aa14.24□□□□□ -0.13
PDPN-210ENST00000513143 ZNF174Q15697 407 aa14.24□□□□□ -0.13
PDPN-210ENST00000513143 JMYQ8N9B5 988 aa14.24□□□□□ -0.13
PDPN-210ENST00000513143 NPLOC4Q8TAT6 608 aa14.24□□□□□ -0.13
PDPN-210ENST00000513143 ZNF296Q8WUU4 475 aaPredicted RBP14.24□□□□□ -0.13
PDPN-210ENST00000513143 FTOQ9C0B1 505 aaKnown RBP eCLIP14.24□□□□□ -0.13
PDPN-210ENST00000513143 CASP8AP2Q9UKL3 1982 aa14.24□□□□□ -0.13
PDPN-210ENST00000513143 ASB14A6NK59 587 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 FAM86B1E9PN63 330 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 MEIS1O00470 390 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 STAM2O75886 525 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 BAG4O95429 457 aaKnown RBP14.23□□□□□ -0.13
PDPN-210ENST00000513143 YEATS4O95619 227 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 BMP15O95972 392 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 FAM86B2P0C5J1 330 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 MYCLP12524 364 aaPredicted RBP14.23□□□□□ -0.13
PDPN-210ENST00000513143 MCM7P33993 719 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 ZNF76P36508 570 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 RGS2P41220 211 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 CEBPZQ03701 1054 aaKnown RBP14.23□□□□□ -0.13
PDPN-210ENST00000513143 PTPAQ15257 358 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 SF3A1Q15459 793 aaKnown RBP14.23□□□□□ -0.13
PDPN-210ENST00000513143 STXBP2Q15833 593 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 Q4G0T1 1027 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 CEP55Q53EZ4 464 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 MAMDC4Q6UXC1 1216 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 NIPA1Q7RTP0 329 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 CD99L2Q8TCZ2 262 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 ERO1AQ96HE7 468 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 MAML3Q96JK9 1138 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 MPHOSPH6Q99547 160 aaKnown RBP14.23□□□□□ -0.13
PDPN-210ENST00000513143 MXRA8Q9BRK3 442 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 DDX25Q9UHL0 483 aaKnown RBP14.23□□□□□ -0.13
PDPN-210ENST00000513143 RCOR1Q9UKL0 485 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 CEP131Q9UPN4 1083 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 CNPY2Q9Y2B0 182 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 UBIAD1Q9Y5Z9 338 aa14.23□□□□□ -0.13
PDPN-210ENST00000513143 MORC2Q9Y6X9 1032 aaPredicted RBP14.23□□□□□ -0.13
PDPN-210ENST00000513143 IGLV3-22A0A075B6J6 115 aa14.22□□□□□ -0.13
PDPN-210ENST00000513143 SLC37A4O43826 429 aa14.22□□□□□ -0.13
PDPN-210ENST00000513143 GNRH1P01148 92 aa14.22□□□□□ -0.13
PDPN-210ENST00000513143 XRCC5P13010 732 aaKnown RBP14.22□□□□□ -0.13
PDPN-210ENST00000513143 ITGB5P18084 799 aa14.22□□□□□ -0.13
PDPN-210ENST00000513143 NCLP19338 710 aaKnown RBP14.22□□□□□ -0.13
PDPN-210ENST00000513143 SLC39A14Q15043 492 aa14.22□□□□□ -0.13
PDPN-210ENST00000513143 MSL3Q8N5Y2 521 aaKnown RBP14.22□□□□□ -0.13
PDPN-210ENST00000513143 C4orf32Q8N8J7 132 aa14.22□□□□□ -0.13
PDPN-210ENST00000513143 LINC00301Q8NCQ3 95 aa14.22□□□□□ -0.13
PDPN-210ENST00000513143 CYP2W1Q8TAV3 490 aa14.22□□□□□ -0.13
PDPN-210ENST00000513143 LENG9Q96B70 501 aa14.22□□□□□ -0.13
PDPN-210ENST00000513143 APBA2Q99767 749 aa14.22□□□□□ -0.13
PDPN-210ENST00000513143 SCAND2PQ9GZW5 306 aaPredicted RBP14.22□□□□□ -0.13
PDPN-210ENST00000513143 JADE2Q9NQC1 790 aa14.22□□□□□ -0.13
PDPN-210ENST00000513143 TSKSQ9UJT2 592 aa14.22□□□□□ -0.13
PDPN-210ENST00000513143 NEMFO60524 1076 aa14.21□□□□□ -0.13
PDPN-210ENST00000513143 EIF3JO75822 258 aaKnown RBP14.21□□□□□ -0.13
PDPN-210ENST00000513143 CYP2B6P20813 491 aa14.21□□□□□ -0.13
PDPN-210ENST00000513143 HOXD10P28358 340 aa14.21□□□□□ -0.13
PDPN-210ENST00000513143 ATP2C1P98194 919 aaPredicted RBP14.21□□□□□ -0.13
PDPN-210ENST00000513143 PDE4DQ08499 809 aa14.21□□□□□ -0.13
PDPN-210ENST00000513143 PTGDRQ13258 359 aa14.21□□□□□ -0.13
PDPN-210ENST00000513143 ARHGEF6Q15052 776 aa14.21□□□□□ -0.13
PDPN-210ENST00000513143 PRR16Q569H4 304 aa14.21□□□□□ -0.13
PDPN-210ENST00000513143 ARMCX2Q7L311 632 aa14.21□□□□□ -0.13
PDPN-210ENST00000513143 LEO1Q8WVC0 666 aaPredicted RBP14.21□□□□□ -0.13
PDPN-210ENST00000513143 ZFP91Q96JP5 570 aaPredicted RBP14.21□□□□□ -0.13
PDPN-210ENST00000513143 INPP4AQ96PE3 977 aaPredicted RBP14.21□□□□□ -0.13
PDPN-210ENST00000513143 GBP4Q96PP9 640 aa14.21□□□□□ -0.13
PDPN-210ENST00000513143 TMEM60Q9H2L4 133 aa14.21□□□□□ -0.13
PDPN-210ENST00000513143 GABRQQ9UN88 632 aa14.21□□□□□ -0.13
PDPN-210ENST00000513143 DDX49Q9Y6V7 483 aaKnown RBP14.21□□□□□ -0.13
PDPN-210ENST00000513143 SYNGAP1Q96PV0 1343 aa14.2□□□□□ -0.14
PDPN-210ENST00000513143 LAD1O00515 517 aa14.2□□□□□ -0.14
PDPN-210ENST00000513143 RGS20O76081 388 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms