RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 JAKMIP1Q96N16 626 aaKnown RBP7.51□□□□□ -1.21
KDM3B-208ENST00000512928 MAP3K14Q99558 947 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 MTA3Q9BTC8 594 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 SPZ1Q9BXG8 430 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 POLR3EQ9NVU0 708 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 Q9Y3F1 56 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 RBM47A0AV96 593 aaKnown RBP7.5□□□□□ -1.21
KDM3B-208ENST00000512928 GOLGA8AA7E2F4 631 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 GOLGA8BA8MQT2 603 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 KIAA0355O15063 1070 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 EPB41L2O43491 1005 aaKnown RBP7.5□□□□□ -1.21
KDM3B-208ENST00000512928 EIF3JO75822 258 aaKnown RBP7.5□□□□□ -1.21
KDM3B-208ENST00000512928 ARIH2O95376 493 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 GH1P01241 217 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 HMGB1P09429 215 aaKnown RBP7.5□□□□□ -1.21
KDM3B-208ENST00000512928 ITGB8P26012 769 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 PGM5Q15124 567 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 RTN1Q16799 776 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 C9orf50Q5SZB4 431 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 APOA5Q6Q788 366 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 BLOC1S2Q6QNY1 142 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 FAM126BQ8IXS8 530 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 SRBD1Q8N5C6 995 aaKnown RBP7.5□□□□□ -1.21
KDM3B-208ENST00000512928 FANCBQ8NB91 859 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 IL31RAQ8NI17 732 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 AFG1LQ8WV93 481 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 GPKOWQ92917 476 aaPredicted RBP eCLIP7.5□□□□□ -1.21
KDM3B-208ENST00000512928 TOX2Q96NM4 488 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 PDCD2LQ9BRP1 358 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 MTG1Q9BT17 334 aaPredicted RBP7.5□□□□□ -1.21
KDM3B-208ENST00000512928 MAF1Q9H063 256 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 TRPV6Q9H1D0 765 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 RBM28Q9NW13 759 aaKnown RBP7.5□□□□□ -1.21
KDM3B-208ENST00000512928 MAP3K20Q9NYL2 800 aaKnown RBP7.5□□□□□ -1.21
KDM3B-208ENST00000512928 BRPF3Q9ULD4 1205 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 NOD1Q9Y239 953 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 SNX14Q9Y5W7 946 aa7.5□□□□□ -1.21
KDM3B-208ENST00000512928 SPDYE3A6NKU9 549 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 B4GALT4O60513 344 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 TIMP1P01033 207 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 CASTP20810 708 aaKnown RBP7.49□□□□□ -1.21
KDM3B-208ENST00000512928 CYP2C18P33260 490 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 HSPA4P34932 840 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 METAP2P50579 478 aaKnown RBP eCLIP7.49□□□□□ -1.21
KDM3B-208ENST00000512928 CDK7P50613 346 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 NAPAP54920 295 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 NKX3-2P78367 333 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 PURAQ00577 322 aaKnown RBP7.49□□□□□ -1.21
KDM3B-208ENST00000512928 APOBRQ0VD83 1088 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 SHHQ15465 462 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 UBE2SQ16763 222 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 GNPTABQ3T906 1256 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 USP17L6PQ6QN14 398 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 Q6ZUG5 572 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 TMTC3Q6ZXV5 915 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 SGMS1Q86VZ5 419 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 DHX37Q8IY37 1157 aaKnown RBP7.49□□□□□ -1.21
KDM3B-208ENST00000512928 TMEM199Q8N511 208 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 KCNB2Q92953 911 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 BRF1Q92994 677 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 RNPC3Q96LT9 517 aaKnown RBP7.49□□□□□ -1.21
KDM3B-208ENST00000512928 HIPK3Q9H422 1215 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 PSTPIP2Q9H939 334 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 TRMT13Q9NUP7 481 aaKnown RBP7.49□□□□□ -1.21
KDM3B-208ENST00000512928 RTEL1Q9NZ71 1219 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 TBX21Q9UL17 535 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 EYSQ5T1H1 3165 aa7.49□□□□□ -1.21
KDM3B-208ENST00000512928 A6NJR5 290 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 NOP56O00567 594 aaKnown RBP7.48□□□□□ -1.21
KDM3B-208ENST00000512928 KPNA6O60684 536 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 GGPS1O95749 300 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 MMP3P08254 477 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 ZNF286BP0CG31 522 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 CYP2C9P11712 490 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 CSF2RAP15509 400 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 RPS6KB1P23443 525 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 PSMA5P28066 241 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 SMARCA1P28370 1054 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 CCL23P55773 120 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 EXOSC10Q01780 885 aaKnown RBP7.48□□□□□ -1.21
KDM3B-208ENST00000512928 SP4Q02446 784 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 ARHGAP1Q07960 439 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 LAMC2Q13753 1193 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 DGKDQ16760 1214 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 NBPF20Q3BBV1 942 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 LRIT3Q3SXY7 679 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 TSGA10IPQ3SY00 556 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 MFSD5Q6N075 450 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 CCDC62Q6P9F0 684 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 VSIG10LQ86VR7 867 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 SAMD3Q8N6K7 520 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 SPATA33Q96N06 139 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 ALG1Q9BT22 464 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 ALDH8A1Q9H2A2 487 aaPredicted RBP7.48□□□□□ -1.21
KDM3B-208ENST00000512928 MLXIPQ9HAP2 919 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 PKD2L1Q9P0L9 805 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 RAPGEFL1Q9UHV5 662 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 DDX41Q9UJV9 622 aaKnown RBP7.48□□□□□ -1.21
KDM3B-208ENST00000512928 STXBP5LQ9Y2K9 1186 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 V9GY48 417 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms