RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 NCAPHQ15003 741 aa27.37■■□□□ 1.97
SPOCK3-221ENST00000512648 TMEM119Q4V9L6 283 aa27.37■■□□□ 1.97
SPOCK3-221ENST00000512648 NIPA1Q7RTP0 329 aa27.37■■□□□ 1.97
SPOCK3-221ENST00000512648 ARMC9Q7Z3E5 817 aa27.37■■□□□ 1.97
SPOCK3-221ENST00000512648 AOPEPQ8N6M6 819 aa27.37■■□□□ 1.97
SPOCK3-221ENST00000512648 PNMA5Q96PV4 448 aa27.37■■□□□ 1.97
SPOCK3-221ENST00000512648 C7orf25Q9BPX7 421 aa27.37■■□□□ 1.97
SPOCK3-221ENST00000512648 KCNH4Q9UQ05 1017 aa27.37■■□□□ 1.97
SPOCK3-221ENST00000512648 NFIBO00712 420 aa27.36■■□□□ 1.97
SPOCK3-221ENST00000512648 LDLRAD1Q5T700 205 aa27.36■■□□□ 1.97
SPOCK3-221ENST00000512648 CNNM4Q6P4Q7 775 aa27.36■■□□□ 1.97
SPOCK3-221ENST00000512648 LRRC27Q9C0I9 530 aa27.36■■□□□ 1.97
SPOCK3-221ENST00000512648 NT5C3AQ9H0P0 336 aa27.36■■□□□ 1.97
SPOCK3-221ENST00000512648 ZNF214Q9UL59 606 aaPredicted RBP27.36■■□□□ 1.97
SPOCK3-221ENST00000512648 KDM3AQ9Y4C1 1321 aa27.36■■□□□ 1.97
SPOCK3-221ENST00000512648 A0A0G2JLL6 359 aaPredicted RBP27.35■■□□□ 1.97
SPOCK3-221ENST00000512648 MEIS1O00470 390 aa27.35■■□□□ 1.97
SPOCK3-221ENST00000512648 MSH4O15457 936 aa27.35■■□□□ 1.97
SPOCK3-221ENST00000512648 BCRP11274 1271 aa27.35■■□□□ 1.97
SPOCK3-221ENST00000512648 TPM4P67936 248 aa27.35■■□□□ 1.97
SPOCK3-221ENST00000512648 SPIRE1Q08AE8 756 aa27.35■■□□□ 1.97
SPOCK3-221ENST00000512648 PPIL2Q13356 520 aa27.35■■□□□ 1.97
SPOCK3-221ENST00000512648 CUL4BQ13620 913 aa27.35■■□□□ 1.97
SPOCK3-221ENST00000512648 CEP55Q53EZ4 464 aa27.35■■□□□ 1.97
SPOCK3-221ENST00000512648 ISM2Q6H9L7 571 aa27.35■■□□□ 1.97
SPOCK3-221ENST00000512648 PRRT2Q7Z6L0 340 aaPredicted RBP27.35■■□□□ 1.97
SPOCK3-221ENST00000512648 SYTL5Q8TDW5 730 aaPredicted RBP27.35■■□□□ 1.97
SPOCK3-221ENST00000512648 TRERF1Q96PN7 1200 aa27.35■■□□□ 1.97
SPOCK3-221ENST00000512648 POTEMA6NI47 508 aa27.34■■□□□ 1.97
SPOCK3-221ENST00000512648 SETQ01105 290 aaPredicted RBP27.34■■□□□ 1.97
SPOCK3-221ENST00000512648 MYL5Q02045 173 aa27.34■■□□□ 1.97
SPOCK3-221ENST00000512648 ENOX1Q8TC92 643 aaKnown RBP27.34■■□□□ 1.97
SPOCK3-221ENST00000512648 SNX29Q8TEQ0 813 aa27.34■■□□□ 1.97
SPOCK3-221ENST00000512648 BLOC1S4Q9NUP1 217 aa27.34■■□□□ 1.97
SPOCK3-221ENST00000512648 RLFQ13129 1914 aa27.34■■□□□ 1.97
SPOCK3-221ENST00000512648 SPDYE16A6NNV3 312 aaPredicted RBP27.33■■□□□ 1.97
SPOCK3-221ENST00000512648 RPN1P04843 607 aaKnown RBP27.33■■□□□ 1.97
SPOCK3-221ENST00000512648 EAPPQ56P03 285 aaPredicted RBP27.33■■□□□ 1.97
SPOCK3-221ENST00000512648 MUM1L1Q5H9M0 696 aa27.33■■□□□ 1.97
SPOCK3-221ENST00000512648 XRRA1Q6P2D8 792 aa27.33■■□□□ 1.97
SPOCK3-221ENST00000512648 PLA2G4DQ86XP0 818 aa27.33■■□□□ 1.97
SPOCK3-221ENST00000512648 MB21D1Q8N884 522 aa27.33■■□□□ 1.97
SPOCK3-221ENST00000512648 LRRC15Q8TF66 581 aa27.33■■□□□ 1.97
SPOCK3-221ENST00000512648 TEX13BQ9BXU2 312 aa27.33■■□□□ 1.97
SPOCK3-221ENST00000512648 PARP14Q460N5 1801 aa27.33■■□□□ 1.97
SPOCK3-221ENST00000512648 LBX2Q6XYB7 198 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 SV2BQ7L1I2 683 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 SLC5A5Q92911 643 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 CDK5RAP3Q96JB5 506 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 COL20A1Q9P218 1284 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 TMEM132BQ14DG7 1078 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 ZNF658Q5TYW1 1059 aaPredicted RBP27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 PCNX4Q63HM2 1172 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 HAUS3Q68CZ6 603 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 ERMNQ8TAM6 284 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 STAMQ92783 540 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 TRIM44Q96DX7 344 aaPredicted RBP27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 WNK4Q96J92 1243 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 NUDT12Q9BQG2 462 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 MXRA8Q9BRK3 442 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 ELP3Q9H9T3 547 aa27.32■■□□□ 1.96
SPOCK3-221ENST00000512648 IRF6O14896 467 aa27.31■■□□□ 1.96
SPOCK3-221ENST00000512648 RPS6P62753 249 aaKnown RBP27.31■■□□□ 1.96
SPOCK3-221ENST00000512648 RNF207Q6ZRF8 634 aa27.31■■□□□ 1.96
SPOCK3-221ENST00000512648 CYP2W1Q8TAV3 490 aa27.31■■□□□ 1.96
SPOCK3-221ENST00000512648 RAD54LQ92698 747 aa27.31■■□□□ 1.96
SPOCK3-221ENST00000512648 TRIM9Q9C026 710 aa27.31■■□□□ 1.96
SPOCK3-221ENST00000512648 BLZF1Q9H2G9 400 aa27.31■■□□□ 1.96
SPOCK3-221ENST00000512648 RNF146Q9NTX7 359 aa27.31■■□□□ 1.96
SPOCK3-221ENST00000512648 VAV3Q9UKW4 847 aa27.31■■□□□ 1.96
SPOCK3-221ENST00000512648 SMCHD1A6NHR9 2005 aa27.3■■□□□ 1.96
SPOCK3-221ENST00000512648 KLRC4O43908 158 aa27.3■■□□□ 1.96
SPOCK3-221ENST00000512648 PSMD10O75832 226 aa27.3■■□□□ 1.96
SPOCK3-221ENST00000512648 RHOBTB3O94955 611 aa27.3■■□□□ 1.96
SPOCK3-221ENST00000512648 CASP1P29466 404 aa27.3■■□□□ 1.96
SPOCK3-221ENST00000512648 CDC25BP30305 580 aa27.3■■□□□ 1.96
SPOCK3-221ENST00000512648 ZNF75DP51815 510 aa27.3■■□□□ 1.96
SPOCK3-221ENST00000512648 LARP4BQ92615 738 aaKnown RBP27.3■■□□□ 1.96
SPOCK3-221ENST00000512648 MRFAP1L1Q96HT8 127 aa27.3■■□□□ 1.96
SPOCK3-221ENST00000512648 RIPK3Q9Y572 518 aa27.3■■□□□ 1.96
SPOCK3-221ENST00000512648 UBIAD1Q9Y5Z9 338 aa27.3■■□□□ 1.96
SPOCK3-221ENST00000512648 PVALEFA0A1B0GWK0 134 aa27.29■■□□□ 1.96
SPOCK3-221ENST00000512648 PPP1R3GB7ZBB8 358 aa27.29■■□□□ 1.96
SPOCK3-221ENST00000512648 RPA1P27694 616 aa27.29■■□□□ 1.96
SPOCK3-221ENST00000512648 STAT3P40763 770 aa27.29■■□□□ 1.96
SPOCK3-221ENST00000512648 PPP2R5CQ13362 524 aa27.29■■□□□ 1.96
SPOCK3-221ENST00000512648 SNRNP48Q6IEG0 339 aaKnown RBP27.29■■□□□ 1.96
SPOCK3-221ENST00000512648 CCDC47Q96A33 483 aaKnown RBP27.29■■□□□ 1.96
SPOCK3-221ENST00000512648 CLMNQ96JQ2 1002 aa27.29■■□□□ 1.96
SPOCK3-221ENST00000512648 PLIN2Q99541 437 aa27.29■■□□□ 1.96
SPOCK3-221ENST00000512648 RIT2Q99578 217 aa27.29■■□□□ 1.96
SPOCK3-221ENST00000512648 POLR3CQ9BUI4 534 aaPredicted RBP27.29■■□□□ 1.96
SPOCK3-221ENST00000512648 OTOFQ9HC10 1997 aa27.28■■□□□ 1.96
SPOCK3-221ENST00000512648 MUTP22033 750 aa27.28■■□□□ 1.96
SPOCK3-221ENST00000512648 CCT6AP40227 531 aaKnown RBP27.28■■□□□ 1.96
SPOCK3-221ENST00000512648 FKBP1BP68106 108 aa27.28■■□□□ 1.96
SPOCK3-221ENST00000512648 TTLL12Q14166 644 aaPredicted RBP27.28■■□□□ 1.96
SPOCK3-221ENST00000512648 FASTKD5Q7L8L6 764 aaKnown RBP27.28■■□□□ 1.96
SPOCK3-221ENST00000512648 OTOP1Q7RTM1 612 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms