RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 SLC10A5Q5PT55 438 aa10.26□□□□□ -0.77
LIMCH1-215ENST00000512632 CLEC10AQ8IUN9 316 aa10.26□□□□□ -0.77
LIMCH1-215ENST00000512632 MMGT1Q8N4V1 131 aa10.26□□□□□ -0.77
LIMCH1-215ENST00000512632 IFT81Q8WYA0 676 aa10.26□□□□□ -0.77
LIMCH1-215ENST00000512632 ALS2CR12Q96Q35 445 aa10.26□□□□□ -0.77
LIMCH1-215ENST00000512632 RBM12Q9NTZ6 932 aaKnown RBP10.26□□□□□ -0.77
LIMCH1-215ENST00000512632 A0A1W2PQJ5 194 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 TRAF5O00463 557 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 TNNI2P48788 182 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 TPTE2Q6XPS3 522 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 NELFCDQ8IXH7 590 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 PLCD3Q8N3E9 789 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 DDX12PQ92771 950 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 MAGEF1Q9HAY2 307 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 MYH10P35580 1976 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 TCP1P17987 556 aaKnown RBP10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 CACNB1Q02641 598 aaPredicted RBP10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 PTPROQ16827 1216 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 UNC13DQ70J99 1090 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 CCDC84Q86UT8 332 aaPredicted RBP10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 SH2D3CQ8N5H7 860 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 WDR66Q8TBY9 1149 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 TLR10Q9BXR5 811 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 GPCPD1Q9NPB8 672 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 PACSIN2Q9UNF0 486 aaPredicted RBP10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 FTCDO95954 541 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 CDK17Q00537 523 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 CCDC40Q4G0X9 1142 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 C8orf74Q6P047 294 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 TEX11Q8IYF3 940 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 BCAS4Q8TDM0 211 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 BTDP43251 543 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 GNGT1P63211 74 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 LRRC47Q8N1G4 583 aaKnown RBP10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 BAP1Q92560 729 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 RUFY1Q96T51 708 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 SPZ1Q9BXG8 430 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 ZHX3Q9H4I2 956 aa10.25□□□□□ -0.77
LIMCH1-215ENST00000512632 HNRNPH3P31942 346 aaKnown RBP10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 MAGEA9P43362 315 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 ATP1A2P50993 1020 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 SAMM50Q9Y512 469 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 CARSP49589 748 aaKnown RBP10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 KCNMA1Q12791 1236 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 UBE2SQ16763 222 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 KRT79Q5XKE5 535 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 HAUS3Q68CZ6 603 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 PACS2Q86VP3 889 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 LZTS2Q9BRK4 669 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 CAPS2Q9BXY5 557 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 STIM2Q9P246 746 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 SPATA31A1Q5TZJ5 1347 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 GNPATO15228 680 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 KRT14P02533 472 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 PPP1R2P41236 205 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 GUCY2FP51841 1108 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 CORO7P57737 925 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 POLR2FP61218 127 aaKnown RBP10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 KLHDC7AQ5VTJ3 777 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 DNAAF5Q86Y56 855 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 GUF1Q8N442 669 aaKnown RBP10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 NFU1Q9UMS0 254 aa10.24□□□□□ -0.77
LIMCH1-215ENST00000512632 TM4SF1P30408 202 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 TMEM266Q2M3C6 531 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 NOX5Q96PH1 765 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 FGFBP2Q9BYJ0 223 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 EPB41L5Q9HCM4 733 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 LDHCP07864 332 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 GLI1P08151 1106 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 GUCY2DQ02846 1103 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 TRADDQ15628 312 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 ECM1Q16610 540 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 PDXDC1Q6P996 788 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 LRRC55Q6ZSA7 311 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 MICALL1Q8N3F8 863 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 NEDD1Q8NHV4 660 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 TBC1D5Q92609 795 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 NYXQ9GZU5 481 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 ZEB2O60315 1214 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 FGFR1OPO95684 399 aaKnown RBP10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 FAM153BP0C7A2 387 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 EHHADHQ08426 723 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 PDCLQ13371 301 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 FAM153CQ494X1 144 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 TTC31Q49AM3 519 aaPredicted RBP10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 MTMR9Q96QG7 549 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 ADAMTS1Q9UHI8 967 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 FAM153AQ9UHL3 310 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 PVALEFA0A1B0GWK0 134 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 EDIL3O43854 480 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 TLR2O60603 784 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 HSF2BPO75031 334 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 PALMO75781 387 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 LIG3P49916 1009 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 SEMA3FQ13275 785 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 RAPGEF1Q13905 1077 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 PROCA1Q8NCQ7 364 aaPredicted RBP10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 TSG101Q99816 390 aa10.23□□□□□ -0.77
LIMCH1-215ENST00000512632 LSM14BQ9BX40 385 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms