RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 MSANTD4Q8NCY6 345 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 ZNF280CQ8ND82 737 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 SMC1BQ8NDV3 1235 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 CENPIQ92674 756 aaPredicted RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 DIO2Q92813 273 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 OSBP2Q969R2 916 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 KIAA1191Q96A73 305 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 SCLYQ96I15 445 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 CFAP53Q96M91 514 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 NT5C1BQ96P26 610 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 MPHOSPH8Q99549 860 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 SDF4Q9BRK5 362 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 FAM167BQ9BTA0 163 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 TTLL2Q9BWV7 592 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 FHDC1Q9C0D6 1143 aaPredicted RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 ABCG4Q9H172 646 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 TRIT1Q9H3H1 467 aaKnown RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 SMOC1Q9H4F8 434 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 ELAC1Q9H777 363 aaKnown RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 CERS4Q9HA82 394 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 EMC7Q9NPA0 242 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 UBN1Q9NPG3 1134 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 VPS45Q9NRW7 570 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 ATP8A2Q9NTI2 1148 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 TMEM39AQ9NV64 488 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 IRAK4Q9NWZ3 460 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 NSMCE4AQ9NXX6 385 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 SAMD15Q9P1V8 674 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 GIMAP2Q9UG22 337 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 XPO7Q9UIA9 1087 aaKnown RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 HDAC5Q9UQL6 1122 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 ZKSCAN5Q9Y2L8 839 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 RRP7AQ9Y3A4 280 aaKnown RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 SNCAIPQ9Y6H5 919 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 RUSC2Q8N2Y8 1516 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.82□□□□□ -1.8
PVT1-202ENST00000512617 ANKRD34BA5PLL1 514 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 GOLGA6L22H0YM25 854 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 AHCYL1O43865 530 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 PCDHGA12O60330 932 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 DKC1O60832 514 aaKnown RBP eCLIP3.82□□□□□ -1.89e-8■■■■■ 74
PVT1-202ENST00000512617 ZBED4O75132 1171 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 SLITRK5O94991 958 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 HTR3BO95264 441 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 DNTTP04053 509 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 CSTBP04080 98 aaKnown RBP3.82□□□□□ -1.8
PVT1-202ENST00000512617 ITGAVP06756 1048 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 AKR1B1P15121 316 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 NME1P15531 152 aaKnown RBP3.82□□□□□ -1.8
PVT1-202ENST00000512617 RAG1P15918 1043 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 ATF7P17544 494 aaPredicted RBP3.82□□□□□ -1.8
PVT1-202ENST00000512617 MUTP22033 750 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 TNFSF4P23510 183 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 ADD1P35611 737 aaKnown RBP3.82□□□□□ -1.8
PVT1-202ENST00000512617 GRIA4P48058 902 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 PRIM2P49643 509 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 ZNF132P52740 706 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 MAPK10P53779 464 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 PMS1P54277 932 aaKnown RBP3.82□□□□□ -1.8
PVT1-202ENST00000512617 SESN3P58005 492 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 DSG1Q02413 1049 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 CLN3Q13286 438 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 DDB1Q16531 1140 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 RPS26P11Q5JNZ5 115 aaPredicted RBP3.82□□□□□ -1.8
PVT1-202ENST00000512617 C6orf118Q5T5N4 469 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 NEK10Q6ZWH5 1172 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 NLRC3Q7RTR2 1065 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 CATSPER4Q7RTX7 472 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 OVCH2Q7RTZ1 564 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 WAPLQ7Z5K2 1190 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 BTLAQ7Z6A9 289 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 DDX53Q86TM3 631 aaKnown RBP3.82□□□□□ -1.8
PVT1-202ENST00000512617 ARHGEF25Q86VW2 580 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 ZNF227Q86WZ6 799 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 IQCA1Q86XH1 822 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 GRAMD1CQ8IYS0 662 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 CEP57L1Q8IYX8 460 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 NRSN1Q8IZ57 195 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 MIER2Q8N344 545 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 CAMKK1Q8N5S9 505 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 ESX1Q8N693 406 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 ZNF513Q8N8E2 541 aaPredicted RBP3.82□□□□□ -1.8
PVT1-202ENST00000512617 LRRN4CLQ8ND94 238 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 OR8H1Q8NGG4 311 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 MGARPQ8TDB4 240 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 RHBDD1Q8TEB9 315 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 DIS3LQ8TF46 1054 aaKnown RBP3.82□□□□□ -1.8
PVT1-202ENST00000512617 UCMAQ8WVF2 138 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 TRAPPC12Q8WVT3 735 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 PTPRN2Q92932 1015 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 SNX21Q969T3 373 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 ARL8AQ96BM9 186 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 ATG4CQ96DT6 458 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 TRIM11Q96F44 468 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 TEKT5Q96M29 485 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 ZSCAN10Q96SZ4 725 aaPredicted RBP3.82□□□□□ -1.8
PVT1-202ENST00000512617 PPP1R16BQ96T49 567 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 OSMRQ99650 979 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 ORAI3Q9BRQ5 295 aa3.82□□□□□ -1.8
PVT1-202ENST00000512617 ZKSCAN3Q9BRR0 538 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms