RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 PPP2R5BQ15173 497 aa12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 CTR9Q6PD62 1173 aa12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 ANKRD35Q8N283 1001 aa12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 KATNBL1Q9H079 304 aa12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 DDX49Q9Y6V7 483 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 TRIP12Q14669 1992 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 SH2B2O14492 632 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 PRC1O43663 620 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 LARGE1O95461 756 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 EEF2P13639 858 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 IRS1P35568 1242 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 KCNJ6P48051 423 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 HAND2P61296 217 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 NKX3-2P78367 333 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 HMGN5P82970 282 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 ZP2Q05996 745 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 TMEM63BQ5T3F8 832 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 C12orf60Q5U649 245 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 STK11IPQ8N1F8 1099 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 SMARCC2Q8TAQ2 1214 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 IGDCC4Q8TDY8 1250 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 ESR2Q92731 530 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 BRF1Q92994 677 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 NUP88Q99567 741 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 TEX13BQ9BXU2 312 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 MUTYHQ9UIF7 546 aa12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 GNEQ9Y223 722 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-217ENST00000512274 TNKSO95271 1327 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 NEDD4P46934 1319 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 TANC1Q9C0D5 1861 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 DHX16O60231 1041 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 SUPT20HL2P0C7V6 817 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 SMPD1P17405 629 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 CNTN2Q02246 1040 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 SART3Q15020 963 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 NFKBIBQ15653 356 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 PUS10Q3MIT2 529 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 CCDC178Q5BJE1 867 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 FAM47CQ5HY64 1035 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 RETREG2Q8NC44 543 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 TGS1Q96RS0 853 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 ZNF287Q9HBT7 754 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 RAVER2Q9HCJ3 691 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 PDGFCQ9NRA1 345 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 SMC3Q9UQE7 1217 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 KIF3AQ9Y496 699 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 CTDP1Q9Y5B0 961 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 WDFY4Q6ZS81 3184 aa12.13□□□□□ -0.47
PDLIM5-217ENST00000512274 USP17L12C9JPN9 530 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 USP17L21D6R901 530 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 IQCF3P0C7M6 154 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 PDIA3P30101 505 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 DEFB103AP81534 67 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 TCF15Q12870 199 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 FAM117BQ6P1L5 589 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 EEPD1Q7L9B9 569 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 AMOTL1Q8IY63 956 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 NEK9Q8TD19 979 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 GBP4Q96PP9 640 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 SLF1Q9BQI6 1058 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 SEZ6LQ9BYH1 1024 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 GOPCQ9HD26 462 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 TCP11L1Q9NUJ3 509 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 ZSWIM5Q9P217 1185 aa12.12□□□□□ -0.47
PDLIM5-217ENST00000512274 TRANK1O15050 2925 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 PLIN4Q96Q06 1357 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 C19orf67A6NJJ6 358 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 DDX11L8A8MPP1 907 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 B4E1Z4 1266 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 MYL3P08590 195 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 RFC2P35250 354 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 ERVK-21P61565 698 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 WDR5P61964 334 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 FGD1P98174 961 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 PDE4BQ07343 736 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 CYB5R4Q7L1T6 521 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 CCDC83Q8IWF9 413 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 ADHFE1Q8IWW8 467 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 TNPO1Q92973 898 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 PBXIP1Q96AQ6 731 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 LY9Q9HBG7 655 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 HOMER2Q9NSB8 354 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 SWAP70Q9UH65 585 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 ZDHHC9Q9Y397 364 aa12.11□□□□□ -0.47
PDLIM5-217ENST00000512274 KMT2EQ8IZD2 1858 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 LINC01553A4QN01 128 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 ZBED4O75132 1171 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 KDM4AO75164 1064 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 NOVP48745 357 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 SCRN1Q12765 414 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 SEC23AQ15436 765 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 APOA5Q6Q788 366 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 NSUN7Q8NE18 718 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 FBXO22Q8NEZ5 403 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 TCEANC2Q96MN5 208 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 MAP3K14Q99558 947 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 C17orf80Q9BSJ5 609 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 ANP32EQ9BTT0 268 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 PRKAG3Q9UGI9 489 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms