RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 FAM205CA6NFA0 338 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 RBL2Q08999 1139 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 ZNF543Q08ER8 600 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 FBXO2Q9UK22 296 aaPredicted RBP14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 HOXA7P31268 230 aaPredicted RBP14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 LIG4P49917 911 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 COL23A1Q86Y22 540 aaPredicted RBP14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 CLEC10AQ8IUN9 316 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 NAP1L3Q99457 506 aaPredicted RBP14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 FERMT1Q9BQL6 677 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 ADD3Q9UEY8 706 aaKnown RBP14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 POLLQ9UGP5 575 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 SAR1BQ9Y6B6 198 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 LMAN1P49257 510 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 POLGP54098 1239 aaPredicted RBP14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 SPP2Q13103 211 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 SLC15A2Q16348 729 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 TTBK2Q6IQ55 1244 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 TRIM58Q8NG06 486 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 BBXQ8WY36 941 aaPredicted RBP14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 DDX12PQ92771 950 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 PDLIM2Q96JY6 352 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 NRBP2Q9NSY0 501 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 FAM184BQ9ULE4 1060 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 ANKRD26Q9UPS8 1709 aa14.42□□□□□ -0.1
PCDHA4-202ENST00000512229 FAM20AQ96MK3 541 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 THAP9Q9H5L6 903 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 ENTPD3O75355 529 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 RPS6KA1Q15418 735 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 STYK1Q6J9G0 422 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 C8orf74Q6P047 294 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 PARVGQ9HBI0 331 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 TRPC6Q9Y210 931 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 LRRIQ4A6NIV6 560 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 PP2D1A8MPX8 630 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 N4BP1O75113 896 aaKnown RBP14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 LRRC63Q05C16 580 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 UNC13DQ70J99 1090 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 POTEDQ86YR6 584 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 CCDC155Q8N6L0 562 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 METTL13Q8N6R0 699 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 PRPF38AQ8NAV1 312 aaKnown RBP14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 CCDC26Q8TAB7 109 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 WRNIP1Q96S55 665 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 ZNF215Q9UL58 517 aaPredicted RBP14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 ZBTB12Q9Y330 459 aaPredicted RBP14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 ZHX2Q9Y6X8 837 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 CEP104O60308 925 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 OPA1O60313 960 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 TDP2O95551 362 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 SEL1L2Q5TEA6 688 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 PEX26Q7Z412 305 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 ZBTB8OSQ8IWT0 167 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 MAP3K14Q99558 947 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 BPIFA3Q9BQP9 254 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 AGXT2Q9BYV1 514 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 TSKSQ9UJT2 592 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 FEM1BQ9UK73 627 aa14.41□□□□□ -0.1
PCDHA4-202ENST00000512229 MON2Q7Z3U7 1717 aa14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 FOXN1O15353 648 aa14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 KRT31Q15323 416 aa14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 UTP14CQ5TAP6 766 aaKnown RBP14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 GSTA5Q7RTV2 222 aa14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 SLC7A3Q8WY07 619 aa14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 SLC5A4Q9NY91 659 aa14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 VGLL2Q8N8G2 317 aa14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 U2AF1L4Q8WU68 220 aaKnown RBP14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 ZFP91Q96JP5 570 aaPredicted RBP14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 CEP170P1Q96L14 293 aa14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 TRIM6Q9C030 488 aaPredicted RBP14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 GTF2F1P35269 517 aaKnown RBP eCLIP14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 LIN9Q5TKA1 542 aa14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 RNF207Q6ZRF8 634 aa14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 FAM186BQ8IYM0 893 aa14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 POMGNT1Q8WZA1 660 aa14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 NYAP2Q9P242 653 aa14.4□□□□□ -0.1
PCDHA4-202ENST00000512229 PVALEFA0A1B0GWK0 134 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 TCRBV5S4A2TA0A5A2 114 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 HNRNPDLO14979 420 aaKnown RBP14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 CLIC2O15247 247 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 SRGNP10124 158 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 DLATP10515 647 aaKnown RBP14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 PDHBP11177 359 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 CD19P15391 556 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 PSMC2P35998 433 aaKnown RBP14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 IREB2P48200 963 aaKnown RBP14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 CTTNQ14247 550 aaKnown RBP14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 CFAP221Q4G0U5 840 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 TCP11X2Q5H9J9 407 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 HDXQ7Z353 690 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 SYCE1Q8N0S2 351 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 PRR29P0C7W0 189 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 PRCPP42785 496 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 USP11P51784 963 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 CCNA1P78396 465 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 PPM1KQ8N3J5 372 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 ANKRD13CQ8N6S4 541 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 UBL4BQ8N7F7 174 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 TSC1Q92574 1164 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms