RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 KIFC2Q96AC6 838 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 COA7Q96BR5 231 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 HMGB1P1B2RPK0 211 aaPredicted RBP11.85□□□□□ -0.51
CPNE4-209ENST00000512055 SLFN14P0C7P3 912 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 KIAA2013Q8IYS2 634 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 RPGRIP1Q96KN7 1286 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 PCDHA12Q9UN75 941 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 OVOS2A0A0G2JMS6 1433 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 GAS8O95995 478 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 UTP14CQ5TAP6 766 aaKnown RBP11.85□□□□□ -0.51
CPNE4-209ENST00000512055 TRIM6Q9C030 488 aaPredicted RBP11.85□□□□□ -0.51
CPNE4-209ENST00000512055 DNAJC5Q9H3Z4 198 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 IKBKBO14920 756 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 RNF40O75150 1001 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 CTDNEP1O95476 244 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 EEF1DP29692 281 aaKnown RBP11.85□□□□□ -0.51
CPNE4-209ENST00000512055 ESRRGP62508 458 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 CCDC93Q567U6 631 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 TMTC3Q6ZXV5 915 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 SPICE1Q8N0Z3 855 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 FNBP4Q8N3X1 1017 aaPredicted RBP11.85□□□□□ -0.51
CPNE4-209ENST00000512055 NAPGQ99747 312 aaPredicted RBP11.85□□□□□ -0.51
CPNE4-209ENST00000512055 YIPF3Q9GZM5 350 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 PPP2R2CQ9Y2T4 447 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 FAM170AA1A519 330 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 ICA1Q05084 483 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 FLCNQ8NFG4 579 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 MGARPQ8TDB4 240 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 GSDMAQ96QA5 445 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 SPZ1Q9BXG8 430 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 GIMAP4Q9NUV9 329 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 DNM3Q9UQ16 869 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 LOC102724159A0A0B4J2E5 919 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 ARHGEF9O43307 516 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 CDK8P49336 464 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 PSMD2Q13200 908 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 PWP2Q15269 919 aaKnown RBP11.85□□□□□ -0.51
CPNE4-209ENST00000512055 TAOK1Q7L7X3 1001 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 KRT27Q7Z3Y8 459 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 PSMB7Q99436 277 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 GLT8D2Q9H1C3 349 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 SERPINB13Q9UIV8 391 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 SLC4A7Q9Y6M7 1214 aa11.85□□□□□ -0.51
CPNE4-209ENST00000512055 ABCC12Q96J65 1359 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 WDR19Q8NEZ3 1342 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 TRPA1O75762 1119 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 CDC25BP30305 580 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 RESP18Q5W5W9 173 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 GPR161Q8N6U8 529 aaKnown RBP11.84□□□□□ -0.51
CPNE4-209ENST00000512055 GDAP1L1Q96MZ0 367 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 NLRC4Q9NPP4 1024 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 PCDHA1Q9Y5I3 950 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 AK9Q5TCS8 1911 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 SERPINB6P35237 376 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 TRAPPC10P48553 1259 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 RNASE9P60153 205 aaKnown RBP11.84□□□□□ -0.51
CPNE4-209ENST00000512055 SLFN13Q68D06 897 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 GALNT17Q6IS24 598 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 CCDC26Q8TAB7 109 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 TBCKQ8TEA7 893 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 NCAPGQ9BPX3 1015 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 TRIM31Q9BZY9 425 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.84□□□□□ -0.51
CPNE4-209ENST00000512055 PAIP2BQ9ULR5 123 aaKnown RBP11.84□□□□□ -0.51
CPNE4-209ENST00000512055 SPATA31A1Q5TZJ5 1347 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 RPL13P26373 211 aaKnown RBP11.84□□□□□ -0.51
CPNE4-209ENST00000512055 ETF1P62495 437 aaKnown RBP11.84□□□□□ -0.51
CPNE4-209ENST00000512055 SGMS1Q86VZ5 419 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 GOLGA5Q8TBA6 731 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.84□□□□□ -0.51
CPNE4-209ENST00000512055 SLC4A1P02730 911 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 FDPSP14324 419 aaKnown RBP11.84□□□□□ -0.51
CPNE4-209ENST00000512055 PTPREP23469 700 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.84□□□□□ -0.51
CPNE4-209ENST00000512055 FBXO41Q8TF61 875 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 SH2D4AQ9H788 454 aa11.84□□□□□ -0.51
CPNE4-209ENST00000512055 EPB41L4AQ9HCS5 686 aaPredicted RBP11.84□□□□□ -0.51
CPNE4-209ENST00000512055 DDX25Q9UHL0 483 aaKnown RBP11.84□□□□□ -0.51
CPNE4-209ENST00000512055 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.84□□□□□ -0.51
CPNE4-209ENST00000512055 CACNB3P54284 484 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 SCHIP1Q9P0W5 487 aaPredicted RBP11.83□□□□□ -0.52
CPNE4-209ENST00000512055 KLHL14Q9P2G3 628 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 I3L4J1 428 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 CCDC89Q8N998 374 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 IGDCC4Q8TDY8 1250 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 CLRN2A0PK11 232 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 CASP14P31944 242 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 NFIXQ14938 502 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 TYW1BQ6NUM6 668 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 RINLQ6ZS11 566 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 SND1Q7KZF4 910 aaKnown RBP eCLIP11.83□□□□□ -0.52
CPNE4-209ENST00000512055 PAGE5Q96GU1 130 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 CD209Q9NNX6 404 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 TMEM232C9JQI7 657 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 GDF11O95390 407 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 NTSR2O95665 410 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 MYCLP12524 364 aaPredicted RBP11.83□□□□□ -0.52
CPNE4-209ENST00000512055 TAF11Q15544 211 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 TTC19Q6DKK2 380 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms