RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 FGD4Q96M96 766 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 DNAJC7Q99615 494 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 DHRS4Q9BTZ2 278 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 DNAI2Q9GZS0 605 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 DEF6Q9H4E7 631 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZNF233A6NK53 670 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 BTBD18B2RXH4 712 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 DYNC1I1O14576 645 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 VIMP08670 466 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 EPB41P11171 864 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 GNAZP19086 355 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 PDIA3P30101 505 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 MCAMP43121 646 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 ADAM17P78536 824 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 ITIH3Q06033 890 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 FZD5Q13467 585 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 HYIQ5T013 277 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 RNF43Q68DV7 783 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 LRRC31Q6UY01 552 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 TMEM184AQ6ZMB5 413 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 KIAA1211Q6ZU35 1233 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 ANKRD33Q7Z3H0 272 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 RASAL3Q86YV0 1011 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 TMC8Q8IU68 726 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 KBTBD2Q8IY47 623 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 DDX54Q8TDD1 881 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 BBXQ8WY36 941 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 SMARCE1Q969G3 411 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 TLCD1Q96CP7 247 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 CNOT8Q9UFF9 292 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 TFR2Q9UP52 801 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 POLEQ07864 2286 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 SPDYE5A6NIY4 337 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 EIF3DO15371 548 aaKnown RBP eCLIP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 OPA1O60313 960 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 CETPP11597 493 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 NEFHP12036 1026 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 MX1P20591 662 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 JAM2P57087 298 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 PLOD1Q02809 727 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 GPS2Q13227 327 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZKSCAN2Q63HK3 967 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 MREGQ8N565 214 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 CABLES1Q8TDN4 633 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 PRPF31Q8WWY3 499 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCDC47Q96A33 483 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 SLC7A6OSQ96CW6 309 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 GMCL1Q96IK5 515 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 WDR18Q9BV38 432 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 PCIF1Q9H4Z3 704 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 EBF2Q9HAK2 575 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 TENM1Q9UKZ4 2725 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 A0A1W2PQ27 194 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 A0A1W2PQ64 194 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 A0A1W2PQD8 194 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 SHISA7A6NL88 538 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 EXOC5O00471 708 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 ATMINO43313 823 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 DESP17661 470 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZNF75DP51815 510 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 PTP4A2Q12974 167 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 GCKRQ14397 625 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 PDIA5Q14554 519 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 ESCO1Q5FWF5 840 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 OR52E8Q6IFG1 317 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 CPLX2Q6PUV4 134 aaKnown RBP1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 MAMDC4Q6UXC1 1216 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 DBX2Q6ZNG2 339 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 ERC1Q8IUD2 1116 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 CPSF7Q8N684 471 aaKnown RBP1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 ERCC4Q92889 916 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 MTMR9Q96QG7 549 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZSWIM1Q9BR11 485 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 PUS7LQ9H0K6 701 aaKnown RBP1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 GPR108Q9NPR9 543 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 POLR3EQ9NVU0 708 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 KBTBD4Q9NVX7 518 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 MIS18AQ9NYP9 233 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 NOC2LQ9Y3T9 749 aaKnown RBP1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 SDK1Q7Z5N4 2213 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 C5orf67F2Z3F1 127 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 BBOX1O75936 387 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 CD48P09326 243 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 NPR1P16066 1061 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 RFX1P22670 979 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 IRS1P35568 1242 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 GYS2P54840 703 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 KIF23Q02241 960 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 RAD51AP2Q09MP3 1159 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 IFT88Q13099 833 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 MAPK7Q13164 816 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 OS9Q13438 667 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 TWISTNBQ3B726 338 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 IQCCQ4KMZ1 466 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 CYP4A22Q5TCH4 519 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 CC2D1AQ6P1N0 951 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 GPR155Q7Z3F1 870 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 TXNRD3Q86VQ6 643 aa1.91□□□□□ -2.1
TRAPPC13-211ENST00000512009 SUGP1Q8IWZ8 645 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms