RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 MTFR1LQ9H019 292 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 CYP4F11Q9HBI6 524 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 RASSF1Q9NS23 344 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 DONSONQ9NYP3 566 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 TRIM17Q9Y577 477 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 PAXBP1Q9Y5B6 917 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 TUBGCP6Q96RT7 1819 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 ABHD14A-ACY1A0A1B0GW23 586 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 G3V3G9 751 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 TNFRSF21O75509 655 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 IGHA2P01877 340 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 KRT13P13646 458 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 PLCG2P16885 1265 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 MUTP22033 750 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 IL6STP40189 918 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 SKOR1P84550 965 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 KIAA1211Q6ZU35 1233 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 LHFPL2Q6ZUX7 228 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 MYOCDQ8IZQ8 938 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 JMYQ8N9B5 988 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 MSANTD4Q8NCY6 345 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 FLAD1Q8NFF5 587 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 TPCN2Q8NHX9 752 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 TNIP3Q96KP6 325 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 TMEM121BQ9BXQ6 578 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 STK31Q9BXU1 1019 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 SLC13A1Q9BZW2 595 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 FBRSQ9HAH7 460 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 BABAM1Q9NWV8 329 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 ADAMTS1Q9UHI8 967 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 BOLA1Q9Y3E2 137 aa5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 USP42Q9H9J4 1324 aaKnown RBP5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 COL5A3P25940 1745 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC11-208ENST00000511955 SERTM1A2A2V5 107 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 PDPK1O15530 556 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 PPFIA2O75334 1257 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 KRT38O76015 456 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 FBXO45P0C2W1 286 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 CCNCP24863 283 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 LMNB2Q03252 620 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 FKBP5Q13451 457 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 SEPT6Q14141 434 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 GRM3Q14832 879 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 CCDC30Q5VVM6 783 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 AP1ARQ63HQ0 302 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 TBC1D9BQ66K14 1250 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 KIF6Q6ZMV9 814 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 G2E3Q7L622 706 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 DCLK2Q8N568 766 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 NAT8LQ8N9F0 302 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 BRSK1Q8TDC3 778 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 NSUN6Q8TEA1 469 aaKnown RBP5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 ARHGEF2Q92974 986 aaKnown RBP5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 TCHPQ9BT92 498 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 EFCC1Q9HA90 598 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 ZNF304Q9HCX3 659 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 SCHIP1Q9P0W5 487 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 DBF4Q9UBU7 674 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 TTLL3Q9Y4R7 772 aa5.65□□□□□ -1.51
TRAPPC11-208ENST00000511955 ESPNB1AK53 854 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 KLHL41O60662 606 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 COBLO75128 1261 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 BTF3P20290 206 aaKnown RBP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 GARTP22102 1010 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 POLR2BP30876 1174 aaKnown RBP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 PTGER2P43116 358 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 ZNF280AP59817 542 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 AKAP17AQ02040 695 aaKnown RBP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 MTERF2Q49AM1 385 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 FKBP15Q5T1M5 1219 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 FAM117BQ6P1L5 589 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 STRA8Q7Z7C7 330 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 GALNT13Q8IUC8 556 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 AFAP1L2Q8N4X5 818 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 PPP1R14CQ8TAE6 165 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 TBATAQ96M53 351 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 PPM1MQ96MI6 270 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 ALPK1Q96QP1 1244 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 NIF3L1Q9GZT8 377 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 BCL2L12Q9HB09 334 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 DDX21Q9NR30 783 aaKnown RBP eCLIP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 NFKBIL1Q9UBC1 381 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 CLIP2Q9UDT6 1046 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 NARFQ9UHQ1 456 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 NIP7Q9Y221 180 aaKnown RBP eCLIP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 AK5Q9Y6K8 562 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 UBR3Q6ZT12 1888 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 ANO9A1A5B4 782 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 F6X3S4 739 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 E2F6O75461 281 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 SKAP2O75563 359 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 CAMTA2O94983 1202 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 FAM13AO94988 1023 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 HOXA10P31260 410 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 NFIXQ14938 502 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 VWA3BQ502W6 1294 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 FASTKD5Q7L8L6 764 aaKnown RBP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 SDCCAG8Q86SQ7 713 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 VPS52Q8N1B4 723 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 ZBTB9Q96C00 473 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms