RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 PIK3AP1Q6ZUJ8 805 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 SPICE1Q8N0Z3 855 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 MB21D1Q8N884 522 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 PIBF1Q8WXW3 757 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 CCDC34Q96HJ3 373 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 PAWRQ96IZ0 340 aaKnown RBP10.34□□□□□ -0.75
NR1I3-228ENST00000511676 NUP88Q99567 741 aaPredicted RBP10.34□□□□□ -0.75
NR1I3-228ENST00000511676 FTOQ9C0B1 505 aaKnown RBP eCLIP10.34□□□□□ -0.75
NR1I3-228ENST00000511676 ASCC2Q9H1I8 757 aaPredicted RBP10.34□□□□□ -0.75
NR1I3-228ENST00000511676 CPVLQ9H3G5 476 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 EHMT1Q9H9B1 1298 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 SLC38A10Q9HBR0 1119 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 GABRQQ9UN88 632 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 ADAMTS5Q9UNA0 930 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 PCDHB6Q9Y5E3 794 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 PHIPQ8WWQ0 1821 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 LOC285556D6RIA3 1793 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 TCHHQ07283 1943 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 MKI67P46013 3256 aaKnown RBP10.33□□□□□ -0.76
NR1I3-228ENST00000511676 SLC26A4O43511 780 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 KINO60870 393 aaKnown RBP10.33□□□□□ -0.76
NR1I3-228ENST00000511676 LONP1P36776 959 aaKnown RBP10.33□□□□□ -0.76
NR1I3-228ENST00000511676 ZSCAN23Q3MJ62 389 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 LBX2Q6XYB7 198 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 MCF2L2Q86YR7 1114 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 TDHQ8IZJ6 230 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 ARRDC4Q8NCT1 418 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 ENGASEQ8NFI3 743 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 AK8Q96MA6 479 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 CLSTN2Q9H4D0 955 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 FAM13BQ9NYF5 915 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 TMEM63CQ9P1W3 806 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 USP25Q9UHP3 1055 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 FBXO2Q9UK22 296 aaPredicted RBP10.33□□□□□ -0.76
NR1I3-228ENST00000511676 OGDHLQ9ULD0 1010 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 HPSEQ9Y251 543 aa10.33□□□□□ -0.76
NR1I3-228ENST00000511676 CYP3A7-CYP3A51PA0A087WV96 503 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 ZBED4O75132 1171 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 FLOT1O75955 427 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 CAVIN2O95810 425 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 ELNP15502 786 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 CYP3A7P24462 503 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 SREBF1P36956 1147 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 HERVK_113P62684 666 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 CEBPZQ03701 1054 aaKnown RBP10.32□□□□□ -0.76
NR1I3-228ENST00000511676 COG2Q14746 738 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 EARS2Q5JPH6 523 aaKnown RBP10.32□□□□□ -0.76
NR1I3-228ENST00000511676 PLEKHH3Q7Z736 793 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 FMR1NBQ8N0W7 255 aaPredicted RBP10.32□□□□□ -0.76
NR1I3-228ENST00000511676 FSIP1Q8NA03 581 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 TBCKQ8TEA7 893 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 CRYGNQ8WXF5 182 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 KIFC2Q96AC6 838 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 MBOAT7Q96N66 472 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 TANGO6Q9C0B7 1094 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 UBE2OQ9C0C9 1292 aaKnown RBP10.32□□□□□ -0.76
NR1I3-228ENST00000511676 NUP62CLQ9H1M0 184 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 RPAP3Q9H6T3 665 aaPredicted RBP10.32□□□□□ -0.76
NR1I3-228ENST00000511676 DACT1Q9NYF0 836 aa10.32□□□□□ -0.76
NR1I3-228ENST00000511676 FAM205CA6NFA0 338 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 SLC15A5A6NIM6 579 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 SPDYE3A6NKU9 549 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 VWA5AO00534 786 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 DLL1O00548 723 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 MEIS2O14770 477 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 TBX3O15119 743 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 NEMFO60524 1076 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 CYP3A4P08684 503 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 LIG1P18858 919 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 CTGFP29279 349 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 CIITAP33076 1130 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 COPB2P35606 906 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 HSD17B4P51659 736 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 ERVK-9P63128 1117 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 ERVK-24P63145 666 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 PTGDRQ13258 359 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 SEMA3FQ13275 785 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 SNW1Q13573 536 aaKnown RBP10.31□□□□□ -0.76
NR1I3-228ENST00000511676 ZYXQ15942 572 aaKnown RBP10.31□□□□□ -0.76
NR1I3-228ENST00000511676 INF2Q27J81 1249 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 KANK3Q6NY19 840 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 LRSAM1Q6UWE0 723 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 CATSPERGQ6ZRH7 1159 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 C4orf32Q8N8J7 132 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 APBA2Q99767 749 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 RAB34Q9BZG1 259 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 PRO3102Q9H379 93 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.31□□□□□ -0.76
NR1I3-228ENST00000511676 HOOK1Q9UJC3 728 aaKnown RBP10.31□□□□□ -0.76
NR1I3-228ENST00000511676 GJD2Q9UKL4 321 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 STK24Q9Y6E0 443 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 HTTP42858 3142 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 ZNF536O15090 1300 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 FRMPD4Q14CM0 1322 aa10.31□□□□□ -0.76
NR1I3-228ENST00000511676 A0A0G2JMZ2 1700 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 FSD2A1L4K1 749 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 GCOM1H8Y6P7 765 aaPredicted RBP10.3□□□□□ -0.76
NR1I3-228ENST00000511676 OPLAHO14841 1288 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 NR1I2O75469 434 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms