RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 CCL14Q16627 93 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 TTC39AQ5SRH9 613 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 ATF7IPQ6VMQ6 1270 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 Q7L0L9 218 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 METTL16Q86W50 562 aaKnown RBP8.11□□□□□ -1.11
COPS4-209ENST00000511653 ZNF837Q96EG3 531 aaPredicted RBP8.11□□□□□ -1.11
COPS4-209ENST00000511653 NUCKS1Q9H1E3 243 aaKnown RBP8.11□□□□□ -1.11
COPS4-209ENST00000511653 NDFIP2Q9NV92 336 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 RBPJLQ9UBG7 517 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 OGDHLQ9ULD0 1010 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 SMCHD1A6NHR9 2005 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 MYO9BQ13459 2157 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 ZNFX1Q9P2E3 1918 aaKnown RBP8.11□□□□□ -1.11
COPS4-209ENST00000511653 RECKO95980 971 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 POLR3DP05423 398 aaPredicted RBP8.11□□□□□ -1.11
COPS4-209ENST00000511653 CAPN2P17655 700 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 CCND3P30281 292 aaPredicted RBP8.11□□□□□ -1.11
COPS4-209ENST00000511653 MAGEA10P43363 369 aaPredicted RBP8.11□□□□□ -1.11
COPS4-209ENST00000511653 ERVK-24P63145 666 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 TNP2Q05952 138 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 CACNB2Q08289 660 aaPredicted RBP8.11□□□□□ -1.11
COPS4-209ENST00000511653 EFHC2Q5JST6 749 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 KRT25Q7Z3Z0 450 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 ZNF438Q7Z4V0 828 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 CRACR2BQ8N4Y2 399 aaPredicted RBP8.11□□□□□ -1.11
COPS4-209ENST00000511653 TMEM57Q8N5G2 664 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 SLC17A8Q8NDX2 589 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 USP6NLQ92738 828 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 FRAT1Q92837 279 aaPredicted RBP8.11□□□□□ -1.11
COPS4-209ENST00000511653 ABHD17AQ96GS6 310 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 NOL10Q9BSC4 688 aaKnown RBP8.11□□□□□ -1.11
COPS4-209ENST00000511653 PAGR1Q9BTK6 254 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 DHX36Q9H2U1 1008 aaKnown RBP8.11□□□□□ -1.11
COPS4-209ENST00000511653 C11orf49Q9H6J7 331 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 FAM13BQ9NYF5 915 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 TMOD4Q9NZQ9 345 aa8.11□□□□□ -1.11
COPS4-209ENST00000511653 DBNLQ9UJU6 430 aaKnown RBP8.11□□□□□ -1.11
COPS4-209ENST00000511653 COL11A1P12107 1806 aaPredicted RBP8.1□□□□□ -1.11
COPS4-209ENST00000511653 ZNF236Q9UL36 1845 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 SASH3O75995 380 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 BAG3O95817 575 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 GH2P01242 217 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 MAPTP10636 758 aaKnown RBP8.1□□□□□ -1.11
COPS4-209ENST00000511653 COL6A1P12109 1028 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 XRCC5P13010 732 aaKnown RBP8.1□□□□□ -1.11
COPS4-209ENST00000511653 ZKSCAN1P17029 563 aaPredicted RBP8.1□□□□□ -1.11
COPS4-209ENST00000511653 TARSP26639 723 aaKnown RBP8.1□□□□□ -1.11
COPS4-209ENST00000511653 BMP8BP34820 402 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 ZYXQ15942 572 aaKnown RBP8.1□□□□□ -1.11
COPS4-209ENST00000511653 XKR5Q6UX68 686 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 GPR142Q7Z601 462 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 RAB44Q7Z6P3 723 aaPredicted RBP8.1□□□□□ -1.11
COPS4-209ENST00000511653 C1orf127Q8N9H9 656 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 GPRC5AQ8NFJ5 357 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 SOCS4Q8WXH5 440 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 GPR108Q9NPR9 543 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 ZFATQ9P243 1243 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 MYH7P12883 1935 aa8.1□□□□□ -1.11
COPS4-209ENST00000511653 DLL1O00548 723 aa8.09□□□□□ -1.11
COPS4-209ENST00000511653 PRPF40AO75400 957 aaKnown RBP8.09□□□□□ -1.11
COPS4-209ENST00000511653 CNMDO75829 334 aa8.09□□□□□ -1.11
COPS4-209ENST00000511653 FAM157BP0CG42 384 aa8.09□□□□□ -1.11
COPS4-209ENST00000511653 PCSK2P16519 638 aa8.09□□□□□ -1.11
COPS4-209ENST00000511653 OS9Q13438 667 aaPredicted RBP8.09□□□□□ -1.11
COPS4-209ENST00000511653 MRPL58Q14197 206 aaKnown RBP8.09□□□□□ -1.11
COPS4-209ENST00000511653 LRRC26Q2I0M4 334 aa8.09□□□□□ -1.11
COPS4-209ENST00000511653 MIGA1Q8NAN2 632 aa8.09□□□□□ -1.11
COPS4-209ENST00000511653 SLC30A3Q99726 388 aa8.09□□□□□ -1.11
COPS4-209ENST00000511653 FLRT1Q9NZU1 646 aa8.09□□□□□ -1.11
COPS4-209ENST00000511653 PCDHGC4Q9Y5F7 938 aa8.09□□□□□ -1.11
COPS4-209ENST00000511653 CHD7Q9P2D1 2997 aa8.09□□□□□ -1.11
COPS4-209ENST00000511653 PLXNA1Q9UIW2 1896 aa8.09□□□□□ -1.11
COPS4-209ENST00000511653 REV3LO60673 3130 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 C19orf81C9J6K1 198 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 EREGO14944 169 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 MAPK4P31152 587 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 PDE3AQ14432 1141 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 CCDC158Q5M9N0 1113 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 FOXP4Q8IVH2 680 aaPredicted RBP8.08□□□□□ -1.12
COPS4-209ENST00000511653 TRIM22Q8IYM9 498 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 TDHQ8IZJ6 230 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 DEFB123Q8N688 67 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 ACER1Q8TDN7 264 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 EPS8L3Q8TE67 593 aaKnown RBP8.08□□□□□ -1.12
COPS4-209ENST00000511653 SSH3Q8TE77 659 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 GTPBP3Q969Y2 492 aaKnown RBP8.08□□□□□ -1.12
COPS4-209ENST00000511653 APBA2Q99767 749 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 GSX2Q9BZM3 304 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 CCDC8Q9H0W5 538 aaPredicted RBP8.08□□□□□ -1.12
COPS4-209ENST00000511653 SENP2Q9HC62 589 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 IPO8O15397 1037 aaKnown RBP8.08□□□□□ -1.12
COPS4-209ENST00000511653 SURF6O75683 361 aaKnown RBP8.08□□□□□ -1.12
COPS4-209ENST00000511653 IDH1O75874 414 aaKnown RBP8.08□□□□□ -1.12
COPS4-209ENST00000511653 HLA-DOAP06340 250 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 RLBP1P12271 317 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 VCAM1P19320 739 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 CD33P20138 364 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 CYP7A1P22680 504 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 RGS2P41220 211 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 LRIT3Q3SXY7 679 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms