RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 GPR160Q9UJ42 338 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 TNPO3Q9Y5L0 923 aaKnown RBP4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 KCNQ2O43526 872 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 PSPNO60542 156 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 PDE8AO60658 829 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 HPXP02790 462 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 SOD2P04179 222 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 ASLP04424 464 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 PRKCAP17252 672 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 IGFALSP35858 605 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 PAK1Q13153 545 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 ZNF460Q14592 562 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 KIR3DS1Q14943 382 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 TM4SF20Q53R12 229 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 UBE2R2Q712K3 238 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 LRRTM3Q86VH5 581 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 TEX2Q8IWB9 1127 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 LZTR1Q8N653 840 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 TMEM169Q96HH4 297 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 KCNJ15Q99712 375 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 PLCD4Q9BRC7 762 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 INTS7Q9NVH2 962 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 PPARGC1AQ9UBK2 798 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 FBXL7Q9UJT9 491 aa4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 COA3Q9Y2R0 106 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC11-207ENST00000511409 TCRBV16S1A1N1A0A5B0 115 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 C22orf46C9J442 243 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 FAM47E-STBD1D6RA91 191 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 NRDCO43847 1150 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 GLI1P08151 1106 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 JMJD7P0C870 316 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 IBSPP21815 317 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 FPR2P25090 351 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 GRK2P25098 689 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 GRK3P35626 688 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 CEBPAP49715 358 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 DNM2P50570 870 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 GALK1P51570 392 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 ST5P78524 1137 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 CYP4F8P98187 520 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 NR0B2Q15466 257 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 PKN1Q16512 942 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 CFAP100Q494V2 611 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 BICRALQ6AI39 1079 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 CABP7Q86V35 215 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 LILRA2Q8N149 483 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 UBR7Q8N806 425 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 ABHD4Q8TB40 342 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 DPF3Q92784 378 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 KIRREL1Q96J84 757 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 TARS2Q9BW92 718 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 JAM3Q9BX67 310 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 IPPKQ9H8X2 491 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 SP110Q9HB58 689 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 CATSPERZQ9NTU4 200 aa4.83□□□□□ -1.64
TRAPPC11-207ENST00000511409 ZNF503-AS2A6NEH8 195 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 B4E1Z4 1266 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 KPNA6O60684 536 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 PPP1R11O60927 126 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 MSL3P1P0C860 447 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 GNAT1P11488 350 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 ARL4AP40617 200 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 CORO7P57737 925 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 RBM10P98175 930 aaKnown RBP4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 MVKQ03426 396 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 ZNF124Q15973 351 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 KCNMB1Q16558 191 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 PTPROQ16827 1216 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 TIGD5Q53EQ6 642 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 FAM47CQ5HY64 1035 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 PIK3R6Q5UE93 754 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 FYB2Q5VWT5 728 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 DDX53Q86TM3 631 aaKnown RBP4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 PCDH19Q8TAB3 1148 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 ZCRB1Q8TBF4 217 aaKnown RBP4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 CHAC2Q8WUX2 184 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 LEO1Q8WVC0 666 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 DDX1Q92499 740 aaKnown RBP4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 FBXW5Q969U6 566 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 TMX1Q9H3N1 280 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 PDLIM7Q9NR12 457 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 COQ6Q9Y2Z9 468 aa4.82□□□□□ -1.64
TRAPPC11-207ENST00000511409 A0A087X0B3 334 aa4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 H7BY64 318 aa4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 ARVCFO00192 962 aa4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 GSTA4O15217 222 aa4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 NTRK1P04629 796 aa4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 PYGMP11217 842 aa4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 SOX5P35711 763 aa4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 SNX17Q15036 470 aa4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 CDCA2Q69YH5 1023 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 ZCCHC8Q6NZY4 707 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 NLRP10Q86W26 655 aa4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 CILP2Q8IUL8 1156 aa4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 AHI1Q8N157 1196 aa4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 PPM1KQ8N3J5 372 aa4.81□□□□□ -1.64
TRAPPC11-207ENST00000511409 IGSF22Q8N9C0 903 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms