RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CLEC1BQ9P126 229 aa10.78□□□□□ -0.68
USP53-206ENST00000510737 SUGT1Q9Y2Z0 365 aa10.78□□□□□ -0.68
USP53-206ENST00000510737 PTPRGP23470 1445 aa10.77□□□□□ -0.68
USP53-206ENST00000510737 PLB1Q6P1J6 1458 aa10.77□□□□□ -0.69
USP53-206ENST00000510737 WWC2Q6AWC2 1192 aa10.77□□□□□ -0.69
USP53-206ENST00000510737 VHLLQ6RSH7 139 aa10.77□□□□□ -0.69
USP53-206ENST00000510737 CARFQ8N187 725 aa10.77□□□□□ -0.69
USP53-206ENST00000510737 PLEKHO2Q8TD55 490 aa10.77□□□□□ -0.69
USP53-206ENST00000510737 CPA5Q8WXQ8 436 aa10.77□□□□□ -0.69
USP53-206ENST00000510737 PEX11GQ96HA9 241 aa10.77□□□□□ -0.69
USP53-206ENST00000510737 AKT3Q9Y243 479 aa10.77□□□□□ -0.69
USP53-206ENST00000510737 EMC9Q9Y3B6 208 aa10.77□□□□□ -0.69
USP53-206ENST00000510737 ERICH3Q5RHP9 1530 aa10.77□□□□□ -0.69
USP53-206ENST00000510737 ABCC2Q92887 1545 aa10.76□□□□□ -0.69
USP53-206ENST00000510737 ZBTB7CA1YPR0 619 aa10.76□□□□□ -0.69
USP53-206ENST00000510737 NTRK1P04629 796 aa10.76□□□□□ -0.69
USP53-206ENST00000510737 PLS3P13797 630 aa10.76□□□□□ -0.69
USP53-206ENST00000510737 CACNB2Q08289 660 aaPredicted RBP10.76□□□□□ -0.69
USP53-206ENST00000510737 TRIM26Q12899 539 aaPredicted RBP10.76□□□□□ -0.69
USP53-206ENST00000510737 PTPRMP28827 1452 aa10.75□□□□□ -0.69
USP53-206ENST00000510737 TEX14Q8IWB6 1497 aa10.75□□□□□ -0.69
USP53-206ENST00000510737 ANKRD34BA5PLL1 514 aa10.75□□□□□ -0.69
USP53-206ENST00000510737 NOBOXO60393 691 aa10.75□□□□□ -0.69
USP53-206ENST00000510737 KCNH1O95259 989 aa10.75□□□□□ -0.69
USP53-206ENST00000510737 FUCA1P04066 466 aa10.75□□□□□ -0.69
USP53-206ENST00000510737 PLP2Q04941 152 aa10.75□□□□□ -0.69
USP53-206ENST00000510737 SCRN1Q12765 414 aa10.75□□□□□ -0.69
USP53-206ENST00000510737 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.75□□□□□ -0.69
USP53-206ENST00000510737 KIAA1522Q9P206 1035 aaPredicted RBP10.75□□□□□ -0.69
USP53-206ENST00000510737 C8BP07358 591 aa10.74□□□□□ -0.69
USP53-206ENST00000510737 SLC9A5Q14940 896 aa10.74□□□□□ -0.69
USP53-206ENST00000510737 DDX11Q96FC9 970 aa10.74□□□□□ -0.69
USP53-206ENST00000510737 ADAMTSL3P82987 1691 aa10.73□□□□□ -0.69
USP53-206ENST00000510737 NPHS1O60500 1241 aa10.73□□□□□ -0.69
USP53-206ENST00000510737 ADRB1P08588 477 aa10.73□□□□□ -0.69
USP53-206ENST00000510737 INF2Q27J81 1249 aa10.73□□□□□ -0.69
USP53-206ENST00000510737 ACBD3Q9H3P7 528 aa10.73□□□□□ -0.69
USP53-206ENST00000510737 USP40Q9NVE5 1235 aa10.73□□□□□ -0.69
USP53-206ENST00000510737 NUDT5Q9UKK9 219 aa10.73□□□□□ -0.69
USP53-206ENST00000510737 EPRSP07814 1512 aaKnown RBP10.73□□□□□ -0.69
USP53-206ENST00000510737 SMAD4Q13485 552 aaKnown RBP10.72□□□□□ -0.69
USP53-206ENST00000510737 ERICH6BQ5W0A0 696 aa10.72□□□□□ -0.69
USP53-206ENST00000510737 DBX2Q6ZNG2 339 aa10.72□□□□□ -0.69
USP53-206ENST00000510737 USP33Q8TEY7 942 aa10.72□□□□□ -0.69
USP53-206ENST00000510737 DDX1Q92499 740 aaKnown RBP10.72□□□□□ -0.69
USP53-206ENST00000510737 MRRFQ96E11 262 aaKnown RBP10.72□□□□□ -0.69
USP53-206ENST00000510737 MMP19Q99542 508 aa10.72□□□□□ -0.69
USP53-206ENST00000510737 CUL7Q14999 1698 aa10.72□□□□□ -0.69
USP53-206ENST00000510737 ARNTLO00327 626 aa10.71□□□□□ -0.69
USP53-206ENST00000510737 THBDP07204 575 aa10.71□□□□□ -0.69
USP53-206ENST00000510737 UBXN11Q5T124 520 aa10.71□□□□□ -0.69
USP53-206ENST00000510737 LINC00482Q8N8I6 264 aa10.71□□□□□ -0.69
USP53-206ENST00000510737 BVESQ8NE79 360 aa10.71□□□□□ -0.69
USP53-206ENST00000510737 CPLX3Q8WVH0 158 aa10.71□□□□□ -0.69
USP53-206ENST00000510737 ZBTB8AQ96BR9 441 aa10.71□□□□□ -0.69
USP53-206ENST00000510737 SEC16BQ96JE7 1060 aa10.71□□□□□ -0.69
USP53-206ENST00000510737 MRGPRX3Q96LB0 322 aa10.71□□□□□ -0.69
USP53-206ENST00000510737 GORASP1Q9BQQ3 440 aa10.71□□□□□ -0.69
USP53-206ENST00000510737 KIAA0586Q9BVV6 1533 aa10.71□□□□□ -0.69
USP53-206ENST00000510737 MARCH2Q9P0N8 246 aa10.71□□□□□ -0.69
USP53-206ENST00000510737 TRBV23OR9-2A0A075B6M9 112 aa10.7□□□□□ -0.7
USP53-206ENST00000510737 UNCXA6NJT0 531 aa10.7□□□□□ -0.7
USP53-206ENST00000510737 ZBTB7AO95365 584 aa10.7□□□□□ -0.7
USP53-206ENST00000510737 GTF2IRD2BQ6EKJ0 949 aa10.7□□□□□ -0.7
USP53-206ENST00000510737 GTF2IRD2Q86UP8 949 aa10.7□□□□□ -0.7
USP53-206ENST00000510737 ZNF761Q86XN6 746 aaPredicted RBP10.7□□□□□ -0.7
USP53-206ENST00000510737 TEX2Q8IWB9 1127 aa10.7□□□□□ -0.7
USP53-206ENST00000510737 FAM26EQ8N5C1 309 aa10.7□□□□□ -0.7
USP53-206ENST00000510737 FRS2Q8WU20 508 aa10.7□□□□□ -0.7
USP53-206ENST00000510737 LNPKQ9C0E8 428 aa10.7□□□□□ -0.7
USP53-206ENST00000510737 SGSM2O43147 1006 aa10.69□□□□□ -0.7
USP53-206ENST00000510737 HSPA2P54652 639 aa10.69□□□□□ -0.7
USP53-206ENST00000510737 TRIM59Q8IWR1 403 aa10.69□□□□□ -0.7
USP53-206ENST00000510737 APBA2Q99767 749 aa10.69□□□□□ -0.7
USP53-206ENST00000510737 TBX1O43435 398 aa10.68□□□□□ -0.7
USP53-206ENST00000510737 CNR2P34972 360 aa10.68□□□□□ -0.7
USP53-206ENST00000510737 SARSP49591 514 aaKnown RBP10.68□□□□□ -0.7
USP53-206ENST00000510737 SPATS1Q496A3 300 aa10.68□□□□□ -0.7
USP53-206ENST00000510737 HHIPL2Q6UWX4 724 aa10.68□□□□□ -0.7
USP53-206ENST00000510737 NPLOC4Q8TAT6 608 aa10.68□□□□□ -0.7
USP53-206ENST00000510737 ANAPC16Q96DE5 110 aa10.68□□□□□ -0.7
USP53-206ENST00000510737 TNIKQ9UKE5 1360 aa10.67□□□□□ -0.7
USP53-206ENST00000510737 BTG4Q9NY30 223 aa10.67□□□□□ -0.7
USP53-206ENST00000510737 NTMQ9P121 344 aa10.67□□□□□ -0.7
USP53-206ENST00000510737 TMEFF2Q9UIK5 374 aaPredicted RBP10.67□□□□□ -0.7
USP53-206ENST00000510737 CCDC103Q8IW40 242 aa10.66□□□□□ -0.7
USP53-206ENST00000510737 NKX2-4Q9H2Z4 354 aa10.66□□□□□ -0.7
USP53-206ENST00000510737 CYP26B1Q9NR63 512 aa10.66□□□□□ -0.7
USP53-206ENST00000510737 UHRF1BP1LA0JNW5 1464 aa10.66□□□□□ -0.7
USP53-206ENST00000510737 CYP2C8P10632 490 aa10.65□□□□□ -0.7
USP53-206ENST00000510737 FPR2P25090 351 aa10.65□□□□□ -0.7
USP53-206ENST00000510737 STK32CQ86UX6 486 aa10.65□□□□□ -0.7
USP53-206ENST00000510737 C11orf84Q9BUA3 381 aaPredicted RBP10.65□□□□□ -0.7
USP53-206ENST00000510737 TGIF2Q9GZN2 237 aa10.65□□□□□ -0.7
USP53-206ENST00000510737 UACAQ9BZF9 1416 aa10.65□□□□□ -0.7
USP53-206ENST00000510737 MADDQ8WXG6 1647 aa10.65□□□□□ -0.7
USP53-206ENST00000510737 C22orf46C9J442 243 aa10.64□□□□□ -0.71
USP53-206ENST00000510737 GJA9P57773 515 aa10.64□□□□□ -0.71
USP53-206ENST00000510737 NLRP10Q86W26 655 aa10.64□□□□□ -0.71
USP53-206ENST00000510737 MIB1Q86YT6 1006 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms