RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 MAP3K15Q6ZN16 1313 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 A0A087WUV0 522 aaPredicted RBP11.51□□□□□ -0.57
NEK1-206ENST00000510533 A0A087WWV3 80 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 SORBS3O60504 671 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 SMIM24O75264 130 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 PEX19P40855 299 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 ECE1P42892 770 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 SCNN1DP51172 638 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 LRRC41Q15345 812 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 SGO2Q562F6 1265 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 LRCH2Q5VUJ6 765 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 RASGRP4Q8TDF6 673 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 NRBP2Q9NSY0 501 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 BAG5Q9UL15 447 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 GOLGA8QA0A0J9YX86 632 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 GOLGA8OA6NCC3 632 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 GOLGA8NF8WBI6 632 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 MOCS3O95396 460 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 CLCN6P51797 869 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 ZBED6P86452 979 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 GPATCH4Q5T3I0 446 aaKnown RBP11.51□□□□□ -0.57
NEK1-206ENST00000510533 RNF168Q8IYW5 571 aaPredicted RBP11.51□□□□□ -0.57
NEK1-206ENST00000510533 SCYL3Q8IZE3 742 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 TCP11Q8WWU5 503 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 TRIM4Q9C037 500 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 TSPYL2Q9H2G4 693 aaPredicted RBP11.51□□□□□ -0.57
NEK1-206ENST00000510533 CNOT10Q9H9A5 744 aaKnown RBP11.51□□□□□ -0.57
NEK1-206ENST00000510533 FAF1Q9UNN5 650 aaPredicted RBP11.51□□□□□ -0.57
NEK1-206ENST00000510533 HNRNPDLO14979 420 aaKnown RBP11.51□□□□□ -0.57
NEK1-206ENST00000510533 CTNND1O60716 968 aaKnown RBP11.51□□□□□ -0.57
NEK1-206ENST00000510533 OATP04181 439 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 DHX9Q08211 1270 aaKnown RBP11.51□□□□□ -0.57
NEK1-206ENST00000510533 RCN2Q14257 317 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 PLCB4Q15147 1175 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 ZKSCAN8Q15776 578 aaPredicted RBP11.51□□□□□ -0.57
NEK1-206ENST00000510533 HSP90AA5PQ58FG0 334 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 SMCR8Q8TEV9 937 aaPredicted RBP11.51□□□□□ -0.57
NEK1-206ENST00000510533 SAMSN1Q9NSI8 373 aaKnown RBP11.51□□□□□ -0.57
NEK1-206ENST00000510533 WDR70Q9NW82 654 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 LMTK3Q96Q04 1460 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 HSPA6P17066 643 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 TMOD1P28289 359 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 NNTQ13423 1086 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 HDAC11Q96DB2 347 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 THAP9Q9H5L6 903 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 NHEJ1Q9H9Q4 299 aaPredicted RBP11.51□□□□□ -0.57
NEK1-206ENST00000510533 ATP7AQ04656 1500 aa11.51□□□□□ -0.57
NEK1-206ENST00000510533 SEMA3EO15041 775 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 TTC4O95801 387 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 FTCDO95954 541 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 TCP11X2Q5H9J9 407 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 PDZD8Q8NEN9 1154 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 PANX2Q96RD6 677 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 TRIM56Q9BRZ2 755 aaKnown RBP11.5□□□□□ -0.57
NEK1-206ENST00000510533 PAGR1Q9BTK6 254 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 DISC1Q9NRI5 854 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 IPO11Q9UI26 975 aaKnown RBP11.5□□□□□ -0.57
NEK1-206ENST00000510533 CCPG1Q9ULG6 757 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 GCFC2P16383 781 aaKnown RBP11.5□□□□□ -0.57
NEK1-206ENST00000510533 CXCR5P32302 372 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 TMTC3Q6ZXV5 915 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 FAM133AQ8N9E0 248 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 KLHL29Q96CT2 875 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 ANAPC5Q9UJX4 755 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 FRMD3A2A2Y4 597 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 SPECC1L-ADORA2AF8WAN1 911 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 RPSAP08865 295 aaKnown RBP11.5□□□□□ -0.57
NEK1-206ENST00000510533 SNX1Q13596 522 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 PRPSAP1Q14558 356 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 TMED2Q15363 201 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 ABCB5Q2M3G0 1257 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 C10orf76Q5T2E6 689 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 ALS2CLQ60I27 953 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 ANTXR1Q9H6X2 564 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 SPTLC3Q9NUV7 552 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 ZNF804BA4D1E1 1349 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 SPDYE16A6NNV3 312 aaPredicted RBP11.5□□□□□ -0.57
NEK1-206ENST00000510533 TCP10L2B9ZVM9 353 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 NDUFA10O95299 355 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 EIF4A3P38919 411 aaKnown RBP11.5□□□□□ -0.57
NEK1-206ENST00000510533 MSH2P43246 934 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 ADCY1Q08828 1119 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 KMT5BQ4FZB7 885 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 KIAA0825Q8IV33 1275 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 SH2B2O14492 632 aaPredicted RBP11.5□□□□□ -0.57
NEK1-206ENST00000510533 ADD2P35612 726 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 RESTQ13127 1097 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 SLMAPQ14BN4 828 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 CYP4F22Q6NT55 531 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 CCDC17Q96LX7 622 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 ACCSQ96QU6 501 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 THEGQ9P2T0 379 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 CSADQ9Y600 493 aa11.5□□□□□ -0.57
NEK1-206ENST00000510533 CCNE1P24864 410 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 PPP2R5AQ15172 486 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 E2F5Q15329 346 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 PROSER3Q2NL68 480 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 FAM160B1Q5W0V3 765 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 PPP1R2P3Q6NXS1 205 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms