RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 ARHGAP1Q07960 439 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 PGM5Q15124 567 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 NFXL1Q6ZNB6 911 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 SAMD3Q8N6K7 520 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 PIBF1Q8WXW3 757 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 RNPC3Q96LT9 517 aaKnown RBP11.91□□□□□ -0.5
PFDN1-203ENST00000510217 MTG1Q9BT17 334 aaPredicted RBP11.91□□□□□ -0.5
PFDN1-203ENST00000510217 SEZ6LQ9BYH1 1024 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 TRPV6Q9H1D0 765 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 HIPK3Q9H422 1215 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 MTMR10Q9NXD2 777 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 SSUH2Q9Y2M2 353 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 MYH7BA7E2Y1 1941 aa11.9□□□□□ -0.5
PFDN1-203ENST00000510217 GCOM1H8Y6P7 765 aaPredicted RBP11.9□□□□□ -0.5
PFDN1-203ENST00000510217 EIF3JO75822 258 aaKnown RBP11.9□□□□□ -0.5
PFDN1-203ENST00000510217 GH1P01241 217 aa11.9□□□□□ -0.5
PFDN1-203ENST00000510217 POLR2MP0CAP2 368 aa11.9□□□□□ -0.5
PFDN1-203ENST00000510217 CYP2C18P33260 490 aa11.9□□□□□ -0.5
PFDN1-203ENST00000510217 TRAF1Q13077 416 aa11.9□□□□□ -0.5
PFDN1-203ENST00000510217 PPIGQ13427 754 aaKnown RBP eCLIP11.9□□□□□ -0.5
PFDN1-203ENST00000510217 ADCK5Q3MIX3 580 aa11.9□□□□□ -0.5
PFDN1-203ENST00000510217 BRDTQ58F21 947 aaPredicted RBP11.9□□□□□ -0.5
PFDN1-203ENST00000510217 RNF20Q5VTR2 975 aa11.9□□□□□ -0.5
PFDN1-203ENST00000510217 SGMS1Q86VZ5 419 aa11.9□□□□□ -0.5
PFDN1-203ENST00000510217 RAB11FIP4Q86YS3 637 aa11.9□□□□□ -0.5
PFDN1-203ENST00000510217 SRBD1Q8N5C6 995 aaKnown RBP11.9□□□□□ -0.5
PFDN1-203ENST00000510217 PPP1R13LQ8WUF5 828 aa11.9□□□□□ -0.5
PFDN1-203ENST00000510217 AFG1LQ8WV93 481 aa11.9□□□□□ -0.5
PFDN1-203ENST00000510217 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.9□□□□□ -0.5
PFDN1-203ENST00000510217 NOC4LQ9BVI4 516 aaKnown RBP11.9□□□□□ -0.5
PFDN1-203ENST00000510217 WNT8AQ9H1J5 351 aa11.9□□□□□ -0.5
PFDN1-203ENST00000510217 TRMT13Q9NUP7 481 aaKnown RBP11.9□□□□□ -0.5
PFDN1-203ENST00000510217 DDX41Q9UJV9 622 aaKnown RBP11.9□□□□□ -0.5
PFDN1-203ENST00000510217 MRVI1Q9Y6F6 885 aa11.9□□□□□ -0.5
PFDN1-203ENST00000510217 SCN5AQ14524 2016 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 DOCK5Q9H7D0 1870 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 CALM1P0DP23 149 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 CALM2P0DP24 149 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 CALM3P0DP25 149 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 MYCLP12524 364 aaPredicted RBP11.89□□□□□ -0.51
PFDN1-203ENST00000510217 SMARCA1P28370 1054 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 SMAD3P84022 425 aaKnown RBP11.89□□□□□ -0.51
PFDN1-203ENST00000510217 NBPF20Q3BBV1 942 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 TSGA10IPQ3SY00 556 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 TMEM240Q5SV17 173 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 FAM109BQ6ICB4 259 aaPredicted RBP11.89□□□□□ -0.51
PFDN1-203ENST00000510217 C16orf59Q7L2K0 433 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 FCHSD1Q86WN1 690 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 MICU3Q86XE3 530 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 RASEFQ8IZ41 740 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 CMTR1Q8N1G2 835 aaKnown RBP11.89□□□□□ -0.51
PFDN1-203ENST00000510217 TMTC2Q8N394 836 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 TMEM199Q8N511 208 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 EMID1Q96A84 441 aaPredicted RBP11.89□□□□□ -0.51
PFDN1-203ENST00000510217 RRP36Q96EU6 259 aaKnown RBP11.89□□□□□ -0.51
PFDN1-203ENST00000510217 TCEANC2Q96MN5 208 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 LZTS2Q9BRK4 669 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 SLC12A7Q9Y666 1083 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 GBF1Q92538 1859 aa11.89□□□□□ -0.51
PFDN1-203ENST00000510217 COL6A3P12111 3177 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 KPNA6O60684 536 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 ACRP10323 421 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 CYP2C9P11712 490 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 CCND2P30279 289 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 GNAQP50148 359 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 EXOSC10Q01780 885 aaKnown RBP11.88□□□□□ -0.51
PFDN1-203ENST00000510217 RASIP1Q5U651 963 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 NFRKBQ6P4R8 1299 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 APOA5Q6Q788 366 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 TMTC3Q6ZXV5 915 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 VSIG10LQ86VR7 867 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 PPTC7Q8NI37 304 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 KAT2BQ92831 832 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 GPKOWQ92917 476 aaPredicted RBP eCLIP11.88□□□□□ -0.51
PFDN1-203ENST00000510217 ZFP91Q96JP5 570 aaPredicted RBP11.88□□□□□ -0.51
PFDN1-203ENST00000510217 GUCD1Q96NT3 240 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 NEK1Q96PY6 1258 aa11.88□□□□□ -0.51
PFDN1-203ENST00000510217 DAXXQ9UER7 740 aaPredicted RBP11.88□□□□□ -0.51
PFDN1-203ENST00000510217 SEC63Q9UGP8 760 aaKnown RBP11.88□□□□□ -0.51
PFDN1-203ENST00000510217 CNTNAP5Q8WYK1 1306 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 PIK3CDO00329 1044 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 MEIS2O14770 477 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 HOXD8P13378 290 aaPredicted RBP11.87□□□□□ -0.51
PFDN1-203ENST00000510217 UBA1P22314 1058 aaKnown RBP11.87□□□□□ -0.51
PFDN1-203ENST00000510217 CCL23P55773 120 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 SP2Q02086 613 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 NBR1Q14596 966 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 FAM47CQ5HY64 1035 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 ZNF697Q5TEC3 545 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 PSRC1Q6PGN9 363 aaPredicted RBP11.87□□□□□ -0.51
PFDN1-203ENST00000510217 USP17L6PQ6QN14 398 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 FANCBQ8NB91 859 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 KCNB2Q92953 911 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 VWCEQ96DN2 955 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 FAM161BQ96MY7 647 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 IL23AQ9NPF7 189 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 BRPF3Q9ULD4 1205 aa11.87□□□□□ -0.51
PFDN1-203ENST00000510217 CDH23Q9H251 3354 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 hCG_1642624A0A1W2PR95 340 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 SORBS3O60504 671 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms