RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 TC2NQ8N9U0 490 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 GIMAP8Q8ND71 665 aaPredicted RBP5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 NOC3LQ8WTT2 800 aaKnown RBP5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 FAM151AQ8WW52 585 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 CRYGNQ8WXF5 182 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 HAS1Q92839 578 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 CALML4Q96GE6 196 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 PPP1R13BQ96KQ4 1090 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 PNMA5Q96PV4 448 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 AMNQ9BXJ7 453 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 RAB34Q9BZG1 259 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 PSTPIP2Q9H939 334 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 KCNMB3Q9NPA1 279 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 BLOC1S4Q9NUP1 217 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 EXOC1Q9NV70 894 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 DDX25Q9UHL0 483 aaKnown RBP5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 ZBTB21Q9ULJ3 1066 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 ZNRF3Q9ULT6 936 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 PCDHA1Q9Y5I3 950 aa5.35□□□□□ -1.55
PDLIM5-214ENST00000510099 KDM3AQ9Y4C1 1321 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 A0A1W2PRG0 241 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 CLRN2A0PK11 232 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 LRRC10BA6NIK2 292 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 LGALS16A8MUM7 142 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 KCNJ18B7U540 433 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 TCP10L2B9ZVM9 353 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 USP17L15C9J2P7 530 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 USP17L13C9JLJ4 530 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 USP17L11C9JVI0 530 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 USP17L18D6R9N7 530 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 USP17L22D6RA61 530 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 USP17L17D6RBQ6 530 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 USP17L19D6RCP7 530 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 USP17L20D6RJB6 530 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 MEIS2O14770 477 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 PSMA7O14818 248 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 TEX33O43247 280 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 CTIFO43310 598 aaKnown RBP5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 MFAP3LO75121 409 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 TUBB4AP04350 444 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 BMP3P12645 472 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 EEF1GP26641 437 aaKnown RBP5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 SREBF1P36956 1147 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 TECP42680 631 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 TXKP42681 527 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 COPB1P53618 953 aaKnown RBP5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 PMS1P54277 932 aaKnown RBP5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 TGFB2P61812 414 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 AMPD3Q01432 767 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 EHHADHQ08426 723 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 GOLGA8FQ08AF8 430 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 GOLGA8DPQ0D2H9 430 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 USP17L24Q0WX57 530 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 STIM1Q13586 685 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 TRIM14Q14142 442 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 KCNJ12Q14500 433 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 PTPN14Q15678 1187 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 PTPN21Q16825 1174 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 FILIP1LQ4L180 1135 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 TCP11X2Q5H9J9 407 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 KRT79Q5XKE5 535 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 CEP135Q66GS9 1140 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 USP17L6PQ6QN14 398 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 UNC13DQ70J99 1090 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 FAM83AQ86UY5 434 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 FBXO11Q86XK2 927 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 IRF2BP1Q8IU81 584 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 ANKRD20A12PQ8NF67 263 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 ETNPPLQ8TBG4 499 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 SNX29Q8TEQ0 813 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 LARP4BQ92615 738 aaKnown RBP5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 RAD54LQ92698 747 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 CCDC47Q96A33 483 aaKnown RBP5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 LENG9Q96B70 501 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 DHTKD1Q96HY7 919 aaPredicted RBP5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 PANX2Q96RD6 677 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 PLIN2Q99541 437 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 NUP88Q99567 741 aaPredicted RBP5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 P2RX7Q99572 595 aaKnown RBP5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 THAP9Q9H5L6 903 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 ARHGEF10LQ9HCE6 1279 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 GOPCQ9HD26 462 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 LRWD1Q9UFC0 647 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 PGAP2Q9UHJ9 254 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 TMX2Q9Y320 296 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 PAXBP1Q9Y5B6 917 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 MYH4Q9Y623 1939 aa5.34□□□□□ -1.55
PDLIM5-214ENST00000510099 LTBP3Q9NS15 1303 aa5.33□□□□□ -1.56
PDLIM5-214ENST00000510099 PVALEFA0A1B0GWK0 134 aa5.33□□□□□ -1.56
PDLIM5-214ENST00000510099 A0A1W2PQC6 194 aa5.33□□□□□ -1.56
PDLIM5-214ENST00000510099 BICDL2A1A5D9 508 aa5.33□□□□□ -1.56
PDLIM5-214ENST00000510099 TRIM49BA6NDI0 452 aa5.33□□□□□ -1.56
PDLIM5-214ENST00000510099 MYMKA6NI61 221 aa5.33□□□□□ -1.56
PDLIM5-214ENST00000510099 AKR1B15C9JRZ8 316 aaPredicted RBP5.33□□□□□ -1.56
PDLIM5-214ENST00000510099 BHMG1C9JSJ3 638 aaPredicted RBP5.33□□□□□ -1.56
PDLIM5-214ENST00000510099 H7C1D1 291 aa5.33□□□□□ -1.56
PDLIM5-214ENST00000510099 PIK3CDO00329 1044 aa5.33□□□□□ -1.56
PDLIM5-214ENST00000510099 OPLAHO14841 1288 aa5.33□□□□□ -1.56
PDLIM5-214ENST00000510099 TBX3O15119 743 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms