RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 HOXA13P31271 388 aaPredicted RBP11.77□□□□□ -0.53
SCARB2-204ENST00000509994 TRAF1Q13077 416 aa11.77□□□□□ -0.53
SCARB2-204ENST00000509994 BFSP2Q13515 415 aa11.77□□□□□ -0.53
SCARB2-204ENST00000509994 TMEM67Q5HYA8 995 aa11.77□□□□□ -0.53
SCARB2-204ENST00000509994 NFRKBQ6P4R8 1299 aa11.77□□□□□ -0.53
SCARB2-204ENST00000509994 CATIPQ7Z7H3 387 aa11.77□□□□□ -0.53
SCARB2-204ENST00000509994 FCHSD1Q86WN1 690 aa11.77□□□□□ -0.53
SCARB2-204ENST00000509994 NKX2-4Q9H2Z4 354 aa11.77□□□□□ -0.53
SCARB2-204ENST00000509994 PRDM12Q9H4Q4 367 aa11.77□□□□□ -0.53
SCARB2-204ENST00000509994 PXMP2Q9NR77 195 aa11.77□□□□□ -0.53
SCARB2-204ENST00000509994 COL20A1Q9P218 1284 aa11.77□□□□□ -0.53
SCARB2-204ENST00000509994 CDH23Q9H251 3354 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 A6NJR5 290 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 E7EWF7 191 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 NR3C2P08235 984 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 MMP3P08254 477 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 CASTP20810 708 aaKnown RBP11.76□□□□□ -0.53
SCARB2-204ENST00000509994 RABGGTBP53611 331 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 GRM4Q14833 912 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 SEC23AQ15436 765 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 PTGISQ16647 500 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 DGKDQ16760 1214 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 PPP2R2DQ66LE6 453 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 CASC1Q6TDU7 716 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 NFXL1Q6ZNB6 911 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 DHX37Q8IY37 1157 aaKnown RBP11.76□□□□□ -0.53
SCARB2-204ENST00000509994 MICALL1Q8N3F8 863 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 PIGSQ96S52 555 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 ALG1Q9BT22 464 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 MAD2L2Q9UI95 211 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 CUL9Q8IWT3 2517 aa11.76□□□□□ -0.53
SCARB2-204ENST00000509994 DOCK5Q9H7D0 1870 aa11.75□□□□□ -0.53
SCARB2-204ENST00000509994 GCOM1H8Y6P7 765 aaPredicted RBP11.75□□□□□ -0.53
SCARB2-204ENST00000509994 EIF3JO75822 258 aaKnown RBP11.75□□□□□ -0.53
SCARB2-204ENST00000509994 PFKMP08237 780 aa11.75□□□□□ -0.53
SCARB2-204ENST00000509994 POLR2MP0CAP2 368 aa11.75□□□□□ -0.53
SCARB2-204ENST00000509994 ZNF286BP0CG31 522 aa11.75□□□□□ -0.53
SCARB2-204ENST00000509994 ATP2A2P16615 1042 aaKnown RBP11.75□□□□□ -0.53
SCARB2-204ENST00000509994 CCND2P30279 289 aa11.75□□□□□ -0.53
SCARB2-204ENST00000509994 PTPN11Q06124 597 aaPredicted RBP11.75□□□□□ -0.53
SCARB2-204ENST00000509994 ARHGAP1Q07960 439 aa11.75□□□□□ -0.53
SCARB2-204ENST00000509994 C7orf31Q8N865 590 aa11.75□□□□□ -0.53
SCARB2-204ENST00000509994 CTCFLQ8NI51 663 aaPredicted RBP11.75□□□□□ -0.53
SCARB2-204ENST00000509994 KATNAL1Q9BW62 490 aa11.75□□□□□ -0.53
SCARB2-204ENST00000509994 MAF1Q9H063 256 aa11.75□□□□□ -0.53
SCARB2-204ENST00000509994 SEC63Q9UGP8 760 aaKnown RBP11.75□□□□□ -0.53
SCARB2-204ENST00000509994 PALM3A6NDB9 673 aaPredicted RBP11.74□□□□□ -0.53
SCARB2-204ENST00000509994 SGSM2O43147 1006 aa11.74□□□□□ -0.53
SCARB2-204ENST00000509994 PPP1R11O60927 126 aaPredicted RBP11.74□□□□□ -0.53
SCARB2-204ENST00000509994 RFC2P35250 354 aa11.74□□□□□ -0.53
SCARB2-204ENST00000509994 KCNJ6P48051 423 aa11.74□□□□□ -0.53
SCARB2-204ENST00000509994 HSD17B4P51659 736 aa11.74□□□□□ -0.53
SCARB2-204ENST00000509994 LAMC2Q13753 1193 aa11.74□□□□□ -0.53
SCARB2-204ENST00000509994 CCDC85BQ15834 202 aaPredicted RBP11.74□□□□□ -0.53
SCARB2-204ENST00000509994 RASIP1Q5U651 963 aa11.74□□□□□ -0.53
SCARB2-204ENST00000509994 CCDC62Q6P9F0 684 aa11.74□□□□□ -0.53
SCARB2-204ENST00000509994 CUL5Q93034 780 aa11.74□□□□□ -0.53
SCARB2-204ENST00000509994 SPATA33Q96N06 139 aa11.74□□□□□ -0.53
SCARB2-204ENST00000509994 COL25A1Q9BXS0 654 aaPredicted RBP11.74□□□□□ -0.53
SCARB2-204ENST00000509994 SENP2Q9HC62 589 aa11.74□□□□□ -0.53
SCARB2-204ENST00000509994 RBM8AQ9Y5S9 174 aaKnown RBP11.74□□□□□ -0.53
SCARB2-204ENST00000509994 PNMA6FA0A0J9YX94 578 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 CCDC69A6NI79 296 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 PITPNM1O00562 1244 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 NOP56O00567 594 aaKnown RBP11.73□□□□□ -0.53
SCARB2-204ENST00000509994 MYOGP15173 224 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 KIF5BP33176 963 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 PSEN2P49810 448 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 MFSD10Q14728 455 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 PGM5Q15124 567 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 KIAA0753Q2KHM9 967 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 CHD9Q3L8U1 2897 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 GDF6Q6KF10 455 aaPredicted RBP11.73□□□□□ -0.53
SCARB2-204ENST00000509994 KCNV1Q6PIU1 500 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 IL27Q8NEV9 243 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 RRP36Q96EU6 259 aaKnown RBP11.73□□□□□ -0.53
SCARB2-204ENST00000509994 ZFP91Q96JP5 570 aaPredicted RBP11.73□□□□□ -0.53
SCARB2-204ENST00000509994 PDCD2LQ9BRP1 358 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 MYL10Q9BUA6 226 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 MLXIPQ9HAP2 919 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 DDX41Q9UJV9 622 aaKnown RBP11.73□□□□□ -0.53
SCARB2-204ENST00000509994 YBX2Q9Y2T7 364 aaKnown RBP11.73□□□□□ -0.53
SCARB2-204ENST00000509994 TAF6LQ9Y6J9 622 aa11.73□□□□□ -0.53
SCARB2-204ENST00000509994 KAT6AQ92794 2004 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 OPLAHO14841 1288 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 PRC1O43663 620 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 GGPS1O95749 300 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 IQCF3P0C7M6 154 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 GNPTABQ3T906 1256 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 STOX1Q6ZVD7 989 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 ZNF654Q8IZM8 581 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 USP38Q8NB14 1042 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 IL31RAQ8NI17 732 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 PPTC7Q8NI37 304 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 SMARCC2Q8TAQ2 1214 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 CAGE1Q8TC20 777 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 ZBED2Q9BTP6 218 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 ANO2Q9NQ90 1003 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 MAP3K20Q9NYL2 800 aaKnown RBP11.72□□□□□ -0.53
SCARB2-204ENST00000509994 HDAC6Q9UBN7 1215 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms