RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 MX1P20591 662 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 ZNF543Q08ER8 600 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 PTK7Q13308 1070 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 LAMC2Q13753 1193 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 MFSD10Q14728 455 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 KIAA0753Q2KHM9 967 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 GPATCH4Q5T3I0 446 aaKnown RBP12.12□□□□□ -0.47
MBD4-208ENST00000509828 C20orf194Q5TEA3 1177 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 VPS53Q5VIR6 699 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 SESTD1Q86VW0 696 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 RGS22Q8NE09 1264 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 TTC14Q96N46 770 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 TAAR1Q96RJ0 339 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 RMDN3Q96TC7 470 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 UBA5Q9GZZ9 404 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 C11orf16Q9NQ32 467 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 TCP11L1Q9NUJ3 509 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 GTF2IRD1Q9UHL9 959 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 MRVI1Q9Y6F6 885 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 CHD7Q9P2D1 2997 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.11□□□□□ -0.47
MBD4-208ENST00000509828 LGR5O75473 907 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 CXCL10P02778 98 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 IL9P15248 144 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 THPOP40225 353 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 HAND2P61296 217 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 ARHGAP1Q07960 439 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 ALX1Q15699 326 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 ZNF618Q5T7W0 954 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 CCDC62Q6P9F0 684 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.11□□□□□ -0.47
MBD4-208ENST00000509828 PI4K2BQ8TCG2 481 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 DHX38Q92620 1227 aaKnown RBP12.11□□□□□ -0.47
MBD4-208ENST00000509828 EVI5LQ96CN4 794 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 IWS1Q96ST2 819 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 C17orf80Q9BSJ5 609 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 VAT1LQ9HCJ6 419 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 HELLSQ9NRZ9 838 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 SCN5AQ14524 2016 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 ABCB11O95342 1321 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
MBD4-208ENST00000509828 RSPH10B2B2RC85 870 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 H3BQ06 376 aaPredicted RBP12.1□□□□□ -0.47
MBD4-208ENST00000509828 SORBS3O60504 671 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 EIF3JO75822 258 aaKnown RBP12.1□□□□□ -0.47
MBD4-208ENST00000509828 UPP2O95045 317 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 FGAP02671 866 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 RSPH10BP0C881 870 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 ZNF286BP0CG31 522 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 MYCLP12524 364 aaPredicted RBP12.1□□□□□ -0.47
MBD4-208ENST00000509828 EIF2AK2P19525 551 aaKnown RBP12.1□□□□□ -0.47
MBD4-208ENST00000509828 NOVP48745 357 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 GPNMBQ14956 572 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 CDC37Q16543 378 aaPredicted RBP12.1□□□□□ -0.47
MBD4-208ENST00000509828 TIGD5Q53EQ6 642 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.1□□□□□ -0.47
MBD4-208ENST00000509828 SYTL5Q8TDW5 730 aaPredicted RBP12.1□□□□□ -0.47
MBD4-208ENST00000509828 OTUD7AQ8TE49 926 aaPredicted RBP12.1□□□□□ -0.47
MBD4-208ENST00000509828 TBC1D5Q92609 795 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 ESR2Q92731 530 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 KAT2BQ92831 832 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 MRPL38Q96DV4 380 aaKnown RBP12.1□□□□□ -0.47
MBD4-208ENST00000509828 SAMD11Q96NU1 681 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 YME1L1Q96TA2 773 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 ZKSCAN3Q9BRR0 538 aa12.1□□□□□ -0.47
MBD4-208ENST00000509828 RNF41Q9H4P4 317 aaPredicted RBP12.1□□□□□ -0.47
MBD4-208ENST00000509828 MRPL11Q9Y3B7 192 aaKnown RBP12.1□□□□□ -0.47
MBD4-208ENST00000509828 GRXCR2A6NFK2 248 aa12.09□□□□□ -0.47
MBD4-208ENST00000509828 DCXO43602 365 aa12.09□□□□□ -0.47
MBD4-208ENST00000509828 CFBP00751 764 aa12.09□□□□□ -0.47
MBD4-208ENST00000509828 FGRP09769 529 aa12.09□□□□□ -0.47
MBD4-208ENST00000509828 ZNF200P98182 395 aaPredicted RBP12.09□□□□□ -0.47
MBD4-208ENST00000509828 GPM6BQ13491 265 aa12.09□□□□□ -0.47
MBD4-208ENST00000509828 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
MBD4-208ENST00000509828 CCDC178Q5BJE1 867 aa12.09□□□□□ -0.47
MBD4-208ENST00000509828 BANK1Q8NDB2 785 aa12.09□□□□□ -0.47
MBD4-208ENST00000509828 DBF4BQ8NFT6 615 aa12.09□□□□□ -0.47
MBD4-208ENST00000509828 SEPT8Q92599 483 aa12.09□□□□□ -0.47
MBD4-208ENST00000509828 UPF3BQ9BZI7 483 aaKnown RBP12.09□□□□□ -0.47
MBD4-208ENST00000509828 MAF1Q9H063 256 aa12.09□□□□□ -0.47
MBD4-208ENST00000509828 CPVLQ9H3G5 476 aa12.09□□□□□ -0.47
MBD4-208ENST00000509828 KAT14Q9H8E8 782 aa12.09□□□□□ -0.47
MBD4-208ENST00000509828 DDX41Q9UJV9 622 aaKnown RBP12.09□□□□□ -0.47
MBD4-208ENST00000509828 TRANK1O15050 2925 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 MUC3AQ02505 3323 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 FOXP2O15409 715 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 NR3C2P08235 984 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 HSPD1P10809 573 aaKnown RBP12.08□□□□□ -0.48
MBD4-208ENST00000509828 PCP11498 1178 aaKnown RBP12.08□□□□□ -0.48
MBD4-208ENST00000509828 MRE11P49959 708 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 RBL2Q08999 1139 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 TCTN1Q2MV58 587 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 EPC2Q52LR7 807 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 ANKRD45Q5TZF3 282 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 IQCA1Q86XH1 822 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 FBXO11Q86XK2 927 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 PPTC7Q8NI37 304 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 SPATA33Q96N06 139 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 CTAGE1Q96RT6 745 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 MLXIPQ9HAP2 919 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms