RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 LDLRAD3Q86YD5 345 aa5.55□□□□□ -1.52
NIPBL-206ENST00000509429 SLFN12Q8IYM2 578 aa5.55□□□□□ -1.52
NIPBL-206ENST00000509429 LCORQ96JN0 433 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-206ENST00000509429 AGAP2Q99490 1192 aa5.55□□□□□ -1.52
NIPBL-206ENST00000509429 A0A1W2PQJ5 194 aa5.54□□□□□ -1.52
NIPBL-206ENST00000509429 CCDC189A1A4V9 331 aa5.54□□□□□ -1.52
NIPBL-206ENST00000509429 SATB1Q01826 763 aa5.54□□□□□ -1.52
NIPBL-206ENST00000509429 LMOD3Q0VAK6 560 aa5.54□□□□□ -1.52
NIPBL-206ENST00000509429 NRN1LQ496H8 165 aa5.54□□□□□ -1.52
NIPBL-206ENST00000509429 CCDC184Q52MB2 194 aa5.54□□□□□ -1.52
NIPBL-206ENST00000509429 UTP14CQ5TAP6 766 aaKnown RBP5.54□□□□□ -1.52
NIPBL-206ENST00000509429 TMC3Q7Z5M5 1100 aa5.54□□□□□ -1.52
NIPBL-206ENST00000509429 RPAINQ86UA6 219 aa5.54□□□□□ -1.52
NIPBL-206ENST00000509429 Q8TCH9 128 aa5.54□□□□□ -1.52
NIPBL-206ENST00000509429 MYCBPQ99417 103 aaPredicted RBP5.54□□□□□ -1.52
NIPBL-206ENST00000509429 SRCIN1Q9C0H9 1055 aa5.54□□□□□ -1.52
NIPBL-206ENST00000509429 MRVI1Q9Y6F6 885 aa5.54□□□□□ -1.52
NIPBL-206ENST00000509429 RB1CC1Q8TDY2 1594 aa5.54□□□□□ -1.52
NIPBL-206ENST00000509429 BICDL2A1A5D9 508 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 TDO2P48775 406 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 EPHB4P54760 987 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 TBX4P57082 545 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 EVA1CP58658 441 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 ARHGAP4P98171 946 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 HDLBPQ00341 1268 aaKnown RBP5.53□□□□□ -1.52
NIPBL-206ENST00000509429 PTH1RQ03431 593 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 CACNB2Q08289 660 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-206ENST00000509429 SEPT6Q14141 434 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 CDC37Q16543 378 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-206ENST00000509429 LSM12Q3MHD2 195 aaKnown RBP5.53□□□□□ -1.52
NIPBL-206ENST00000509429 SDE2Q6IQ49 451 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 FAM43AQ8N2R8 423 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 C1orf131Q8NDD1 294 aaKnown RBP5.53□□□□□ -1.52
NIPBL-206ENST00000509429 TMEM52Q8NDY8 209 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 PBXIP1Q96AQ6 731 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 CDADC1Q9BWV3 514 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 BRINP2Q9C0B6 783 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 RSPH9Q9H1X1 276 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-206ENST00000509429 PDCL3Q9H2J4 239 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 MAP3K20Q9NYL2 800 aaKnown RBP5.53□□□□□ -1.52
NIPBL-206ENST00000509429 EGFL7Q9UHF1 273 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 PUF60Q9UHX1 559 aaKnown RBP5.53□□□□□ -1.52
NIPBL-206ENST00000509429 SMC3Q9UQE7 1217 aa5.53□□□□□ -1.52
NIPBL-206ENST00000509429 TLDC2A0PJX2 215 aa5.52□□□□□ -1.53
NIPBL-206ENST00000509429 THBS2P35442 1172 aa5.52□□□□□ -1.53
NIPBL-206ENST00000509429 PSMC1P62191 440 aaKnown RBP5.52□□□□□ -1.53
NIPBL-206ENST00000509429 PRKD1Q15139 912 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-206ENST00000509429 TTBK2Q6IQ55 1244 aa5.52□□□□□ -1.53
NIPBL-206ENST00000509429 SMAP1Q8IYB5 467 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-206ENST00000509429 CCDC74BQ96LY2 380 aa5.52□□□□□ -1.53
NIPBL-206ENST00000509429 DMRTB1Q96MA1 342 aa5.52□□□□□ -1.53
NIPBL-206ENST00000509429 RPS6KC1Q96S38 1066 aa5.52□□□□□ -1.53
NIPBL-206ENST00000509429 PAIP2Q9BPZ3 127 aaKnown RBP5.52□□□□□ -1.53
NIPBL-206ENST00000509429 ANTXR1Q9H6X2 564 aa5.52□□□□□ -1.53
NIPBL-206ENST00000509429 ANAPC4Q9UJX5 808 aa5.52□□□□□ -1.53
NIPBL-206ENST00000509429 CTDP1Q9Y5B0 961 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-206ENST00000509429 SCINQ9Y6U3 715 aa5.52□□□□□ -1.53
NIPBL-206ENST00000509429 VAMP1P23763 118 aa5.51□□□□□ -1.53
NIPBL-206ENST00000509429 PPP2CBP62714 309 aa5.51□□□□□ -1.53
NIPBL-206ENST00000509429 PPP2CAP67775 309 aa5.51□□□□□ -1.53
NIPBL-206ENST00000509429 BIRC2Q13490 618 aa5.51□□□□□ -1.53
NIPBL-206ENST00000509429 PLEKHG6Q3KR16 790 aa5.51□□□□□ -1.53
NIPBL-206ENST00000509429 GJC2Q5T442 439 aaPredicted RBP5.51□□□□□ -1.53
NIPBL-206ENST00000509429 PDILTQ8N807 584 aa5.51□□□□□ -1.53
NIPBL-206ENST00000509429 ITFG2Q969R8 447 aa5.51□□□□□ -1.53
NIPBL-206ENST00000509429 FAM210AQ96ND0 272 aa5.51□□□□□ -1.53
NIPBL-206ENST00000509429 PAGR1Q9BTK6 254 aa5.51□□□□□ -1.53
NIPBL-206ENST00000509429 TBX22Q9Y458 520 aa5.51□□□□□ -1.53
NIPBL-206ENST00000509429 DMRT1Q9Y5R6 373 aa5.51□□□□□ -1.53
NIPBL-206ENST00000509429 C9orf118A6NHY6 69 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 VGLL3A8MV65 326 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 IPO8O15397 1037 aaKnown RBP5.5□□□□□ -1.53
NIPBL-206ENST00000509429 PLCG1P19174 1290 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 LMNB1P20700 586 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 IBSPP21815 317 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-206ENST00000509429 MAN1A1P33908 653 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 MRPS21P82921 87 aaKnown RBP5.5□□□□□ -1.53
NIPBL-206ENST00000509429 HS1BP3Q53T59 392 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 TMEM201Q5SNT2 666 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 EFCAB2Q5VUJ9 269 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 MRGPRGQ86SM5 289 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 PHACTR4Q8IZ21 702 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 TTC30BQ8N4P2 665 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 DDX11Q96FC9 970 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 PCGF6Q9BYE7 350 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 PDLIM7Q9NR12 457 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 CWC25Q9NXE8 425 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-206ENST00000509429 GNEQ9Y223 722 aaKnown RBP5.5□□□□□ -1.53
NIPBL-206ENST00000509429 PCDHB5Q9Y5E4 795 aa5.5□□□□□ -1.53
NIPBL-206ENST00000509429 SCRIBQ14160 1630 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 CARNS1A5YM72 827 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 PPP1R12AO14974 1030 aaPredicted RBP5.49□□□□□ -1.53
NIPBL-206ENST00000509429 TIMM44O43615 452 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 COQ9O75208 318 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 PRAMEF1O95521 474 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 CD151P48509 253 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 CHMP4BP1P59074 171 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 RPS26P62854 115 aaKnown RBP5.49□□□□□ -1.53
NIPBL-206ENST00000509429 SLFN13Q68D06 897 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 SV2BQ7L1I2 683 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms