RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 PCDHB10Q9UN67 800 aa3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 BACE2Q9Y5Z0 518 aa3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 SLC12A7Q9Y666 1083 aa3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 NPEPPSL1A6NEC2 478 aa3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 C2orf71A6NGG8 1288 aa3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 RECKO95980 971 aa3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 R3HDM1Q15032 1099 aaKnown RBP3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 DPY19L1Q2PZI1 675 aa3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 GNPTABQ3T906 1256 aa3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 CD300LDQ6UXZ3 194 aa3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 METTL16Q86W50 562 aaKnown RBP3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 CIR1Q86X95 450 aaPredicted RBP3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 DNERQ8NFT8 737 aa3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 PLEKHO2Q8TD55 490 aa3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 USP33Q8TEY7 942 aa3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 FGD4Q96M96 766 aa3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 WWC2-AS2Q96NR7 200 aa3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 DEF6Q9H4E7 631 aa3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.96□□□□□ -1.78
DEPDC1B-204ENST00000509006 ZBTB7CA1YPR0 619 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 C7orf72A4D263 438 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 PPM1BO75688 479 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 PAMP19021 973 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 VAMP1P23763 118 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 SEPHS1P49903 392 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 SELENOPP49908 381 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 EIF6P56537 245 aaKnown RBP3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 AMPD2Q01433 879 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 SLC7A5Q01650 507 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 SURF1Q15526 300 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 MBLAC2Q68D91 279 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 PLEKHH3Q7Z736 793 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 TTLL6Q8N841 843 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 OR6P1Q8NGX9 317 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 COPS5Q92905 334 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 SHDQ96IW2 340 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 SPATA32Q96LK8 384 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 PTPN18Q99952 460 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 GBP3Q9H0R5 595 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 EFR3BQ9Y2G0 817 aa3.95□□□□□ -1.78
DEPDC1B-204ENST00000509006 NPHP3-ACAD11A0A0J9YXS1 232 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 MUSKO15146 869 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 FUCA1P04066 466 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 ZNF28P17035 718 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 STAT5AP42229 794 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 GJA8P48165 433 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 CASP7P55210 303 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 CYP4F3Q08477 520 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 FHL2Q14192 279 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 PRAMEF18Q5VWM3 479 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 ADAT2Q7Z6V5 191 aaKnown RBP3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 MIB1Q86YT6 1006 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 ZNF654Q8IZM8 581 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 DPF3Q92784 378 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 MBD6Q96DN6 1003 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 CRBNQ96SW2 442 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 MMP19Q99542 508 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 PCDH18Q9HCL0 1135 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 APEX2Q9UBZ4 518 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 CCDC9Q9Y3X0 531 aaKnown RBP3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 TCAF1Q9Y4C2 921 aa3.94□□□□□ -1.78
DEPDC1B-204ENST00000509006 TRBV23OR9-2A0A075B6M9 112 aa3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 C9orf118A6NHY6 69 aa3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 SCAMP3O14828 347 aaKnown RBP3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 SGSM2O43147 1006 aa3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 CYP1A1P04798 512 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 EPHB4P54760 987 aa3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 ZC3H18Q86VM9 953 aaKnown RBP3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 DCP2Q8IU60 420 aaKnown RBP3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 FAM169BQ8N8A8 192 aa3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 GPRASP2Q96D09 838 aa3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 ZSWIM3Q96MP5 696 aa3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 ZNF341Q9BYN7 854 aa3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 C11orf21Q9P2W6 132 aa3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 EMC9Q9Y3B6 208 aa3.93□□□□□ -1.78
DEPDC1B-204ENST00000509006 PATE3B3GLJ2 98 aa3.92□□□□□ -1.78
DEPDC1B-204ENST00000509006 NPIPB8E9PQR5 432 aa3.92□□□□□ -1.78
DEPDC1B-204ENST00000509006 NPHS1O60500 1241 aa3.92□□□□□ -1.78
DEPDC1B-204ENST00000509006 PLS3P13797 630 aa3.92□□□□□ -1.78
DEPDC1B-204ENST00000509006 ADAM9Q13443 819 aa3.92□□□□□ -1.78
DEPDC1B-204ENST00000509006 INF2Q27J81 1249 aa3.92□□□□□ -1.78
DEPDC1B-204ENST00000509006 ARHGEF18Q6ZSZ5 1173 aa3.92□□□□□ -1.78
DEPDC1B-204ENST00000509006 YTHDC1Q96MU7 727 aaKnown RBP3.92□□□□□ -1.78
DEPDC1B-204ENST00000509006 AP5M1Q9H0R1 490 aa3.92□□□□□ -1.78
DEPDC1B-204ENST00000509006 GPRC5CQ9NQ84 441 aa3.92□□□□□ -1.78
DEPDC1B-204ENST00000509006 JADE2Q9NQC1 790 aa3.92□□□□□ -1.78
DEPDC1B-204ENST00000509006 MARCH2Q9P0N8 246 aa3.92□□□□□ -1.78
DEPDC1B-204ENST00000509006 CLEC1BQ9P126 229 aa3.92□□□□□ -1.78
DEPDC1B-204ENST00000509006 ANKRD34BA5PLL1 514 aa3.91□□□□□ -1.78
DEPDC1B-204ENST00000509006 ARNTLO00327 626 aa3.91□□□□□ -1.78
DEPDC1B-204ENST00000509006 KCNH1O95259 989 aa3.91□□□□□ -1.78
DEPDC1B-204ENST00000509006 THBDP07204 575 aa3.91□□□□□ -1.78
DEPDC1B-204ENST00000509006 PPP2CBP62714 309 aa3.91□□□□□ -1.78
DEPDC1B-204ENST00000509006 PPP2CAP67775 309 aa3.91□□□□□ -1.78
DEPDC1B-204ENST00000509006 RBM10P98175 930 aaKnown RBP3.91□□□□□ -1.78
DEPDC1B-204ENST00000509006 SCRN1Q12765 414 aa3.91□□□□□ -1.78
DEPDC1B-204ENST00000509006 CR1LQ2VPA4 569 aa3.91□□□□□ -1.78
DEPDC1B-204ENST00000509006 IGFL4Q6B9Z1 124 aa3.91□□□□□ -1.78
DEPDC1B-204ENST00000509006 KIAA1211LQ6NV74 962 aa3.91□□□□□ -1.78
DEPDC1B-204ENST00000509006 PKN3Q6P5Z2 889 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms