RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 SMARCC2Q8TAQ2 1214 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 BICD2Q8TD16 824 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 ZSCAN31Q96LW9 406 aaPredicted RBP12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 INPP4AQ96PE3 977 aaPredicted RBP12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 AP5M1Q9H0R1 490 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 SLKQ9H2G2 1235 aaPredicted RBP12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 EHMT1Q9H9B1 1298 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 TPCN1Q9ULQ1 816 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 LIMCH1Q9UPQ0 1083 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 NR2E3Q9Y5X4 410 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 ALPK3Q96L96 1907 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 STK36Q9NRP7 1315 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 SMCO2A6NFE2 343 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 ADCY6O43306 1168 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 ABCB7O75027 752 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 RGS20O76081 388 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 PGK1P00558 417 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 HOXA13P31271 388 aaPredicted RBP12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 CPT1AP50416 773 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 NAPAP54920 295 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 SSRP1Q08945 709 aaKnown RBP12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 RABEP1Q15276 862 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 GNPTABQ3T906 1256 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 GNASQ5JWF2 1037 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 USP17L6PQ6QN14 398 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 HEATR3Q7Z4Q2 680 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 RAB11FIP4Q86YS3 637 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 GIMAP8Q8ND71 665 aaPredicted RBP12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 CCDC148Q8NFR7 591 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 CDHR1Q96JP9 859 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 TOX2Q96NM4 488 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 BACH2Q9BYV9 841 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 C6orf50Q9HD87 102 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 PDGFCQ9NRA1 345 aa12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 DDX41Q9UJV9 622 aaKnown RBP12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 NAP1L2Q9ULW6 460 aaPredicted RBP12.16□□□□□ -0.46
POLR2J3-213ENST00000508848 SPDYE3A6NKU9 549 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 SPATA31C2B4DYI2 1134 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 PPFIA4O75335 1185 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 TXNP10599 105 aaKnown RBP12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 HOXD8P13378 290 aaPredicted RBP12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 EIF2AK2P19525 551 aaKnown RBP12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 MCM2P49736 904 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 CDK7P50613 346 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 ADCY7P51828 1080 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 ACLYP53396 1101 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 CCT2P78371 535 aaKnown RBP12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 MRPS9P82933 396 aaKnown RBP12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 SCRN1Q12765 414 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 LAMC2Q13753 1193 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 KCNA10Q16322 511 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 FSCN1Q16658 493 aaKnown RBP12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 TYW1BQ6NUM6 668 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 SLC39A5Q6ZMH5 540 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 NIPA1Q7RTP0 329 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 TLK2Q86UE8 772 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 FBXO16Q8IX29 292 aaPredicted RBP12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 SLC43A3Q8NBI5 491 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 CRYGNQ8WXF5 182 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 WASF1Q92558 559 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 GPRASP2Q96D09 838 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 TBC1D32Q96NH3 1257 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 NCOA5Q9HCD5 579 aaKnown RBP12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 SH2B1Q9NRF2 756 aaPredicted RBP12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 POLR3EQ9NVU0 708 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 PCDHA6Q9UN73 950 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 PCDHA8Q9Y5H6 950 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 SCN10AQ9Y5Y9 1956 aa12.15□□□□□ -0.46
POLR2J3-213ENST00000508848 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 DYNC1LI2O43237 492 aaPredicted RBP12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 FIBPO43427 364 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 GH1P01241 217 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 ASGR1P07306 291 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 CYP3A4P08684 503 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 C6orf222P0C671 652 aaPredicted RBP12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 SREBF1P36956 1147 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 NEDD9Q14511 834 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 ME3Q16798 604 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 GJC2Q5T442 439 aaPredicted RBP12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 ANKRD33Q7Z3H0 272 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 FCHSD1Q86WN1 690 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 DAGLBQ8NCG7 672 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 DIS3LQ8TF46 1054 aaKnown RBP12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 PIBF1Q8WXW3 757 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 GPKOWQ92917 476 aaPredicted RBP eCLIP12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 PHKBQ93100 1093 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 GTF3C6Q969F1 213 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 GLT1D1Q96MS3 346 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 LLPHQ9BRT6 129 aaKnown RBP12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 SLC26A6Q9BXS9 759 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 SENP6Q9GZR1 1112 aaPredicted RBP12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 UBIAD1Q9Y5Z9 338 aa12.14□□□□□ -0.47
POLR2J3-213ENST00000508848 MROH7Q68CQ1 1323 aa12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 A0A1W2PQ45 241 aaPredicted RBP12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 A0A1W2PQY0 241 aa12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 hCG_1642624A0A1W2PR95 340 aa12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 MEIS1O00470 390 aa12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 EVI5O60447 810 aa12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 XBP1P17861 261 aa12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 USP11P51784 963 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms