RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 USP17L17D6RBQ6 530 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 USP17L19D6RCP7 530 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 USP17L20D6RJB6 530 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 H7C1D1 291 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 TEX33O43247 280 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 CD44P16070 742 aaKnown RBP12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 UBA7P41226 1012 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 TECP42680 631 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 CHMP4BP1P59074 171 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 USP17L24Q0WX57 530 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 KLHL10Q6JEL2 608 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 USP17L6PQ6QN14 398 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 CYP26C1Q6V0L0 522 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 ZBED3Q96IU2 234 aaPredicted RBP12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 PARD6BQ9BYG5 372 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 GBP3Q9H0R5 595 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 ZBTB21Q9ULJ3 1066 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 N4BP3O15049 544 aa12.31□□□□□ -0.44
SH3RF1-203ENST00000508685 TBC1D8O95759 1140 aa12.31□□□□□ -0.44
SH3RF1-203ENST00000508685 BMP3P12645 472 aa12.31□□□□□ -0.44
SH3RF1-203ENST00000508685 PRELPP51888 382 aa12.31□□□□□ -0.44
SH3RF1-203ENST00000508685 PAK1Q13153 545 aa12.31□□□□□ -0.44
SH3RF1-203ENST00000508685 WHAMMP3Q1A5X7 153 aa12.31□□□□□ -0.44
SH3RF1-203ENST00000508685 USH1GQ495M9 461 aa12.31□□□□□ -0.44
SH3RF1-203ENST00000508685 RRAGBQ5VZM2 374 aa12.31□□□□□ -0.44
SH3RF1-203ENST00000508685 TXLNBQ8N3L3 684 aa12.31□□□□□ -0.44
SH3RF1-203ENST00000508685 MRPL44Q9H9J2 332 aaKnown RBP12.31□□□□□ -0.44
SH3RF1-203ENST00000508685 SOWAHDA6NJG2 315 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 CASP14P31944 242 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 TXKP42681 527 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 MRPL12P52815 198 aaKnown RBP12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 ZYXQ15942 572 aaKnown RBP12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 FKBP1CQ5VVH2 108 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 RAD9BQ6WBX8 426 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 CCDC84Q86UT8 332 aaPredicted RBP12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 NOC3LQ8WTT2 800 aaKnown RBP12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 DESI2Q9BSY9 194 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 PGAP2Q9UHJ9 254 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 COPB1P53618 953 aaKnown RBP12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 STX17P56962 302 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 SMC1AQ14683 1233 aaKnown RBP12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 CALCRLQ16602 461 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 SYDE2Q5VT97 1194 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 FAM83AQ86UY5 434 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 MSANTD4Q8NCY6 345 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 GJA10Q969M2 543 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 MTMR9Q96QG7 549 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 CCSER1Q9C0I3 900 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 RAB21Q9UL25 225 aa12.3□□□□□ -0.44
SH3RF1-203ENST00000508685 ASTN2O75129 1339 aaPredicted RBP12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 GYPCP04921 128 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 PLCG1P19174 1290 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 PPP1R2P41236 205 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 STIM1Q13586 685 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 KCNB1Q14721 858 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 TNIP1Q15025 636 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 KRT31Q15323 416 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 PTPN21Q16825 1174 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 KIF4BQ2VIQ3 1234 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 TCP11X2Q5H9J9 407 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 ZNF569Q5MCW4 686 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 CABP7Q86V35 215 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 AK8Q96MA6 479 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 P2RX7Q99572 595 aaKnown RBP12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 NAPGQ99747 312 aaPredicted RBP12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 FUT8Q9BYC5 575 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 GLIS2Q9BZE0 524 aaPredicted RBP12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 MAGEF1Q9HAY2 307 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 ARHGEF10LQ9HCE6 1279 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 LZTFL1Q9NQ48 299 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 ABHD10Q9NUJ1 306 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 CTNND2Q9UQB3 1225 aa12.29□□□□□ -0.44
SH3RF1-203ENST00000508685 A0A1W2PQC6 194 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 POTEMA6NI47 508 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 KCNJ18B7U540 433 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 MEIS2O14770 477 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 COBLO75128 1261 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 EIF3JO75822 258 aaKnown RBP12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 RPN1P04843 607 aaKnown RBP12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 EEF1GP26641 437 aaKnown RBP12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 KCNJ12Q14500 433 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 RASA3Q14644 834 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 MTF1Q14872 753 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 TSR1Q2NL82 804 aaKnown RBP12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 FAM83BQ5T0W9 1011 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 HDXQ7Z353 690 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 SAMD7Q7Z3H4 446 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 CPLX3Q8WVH0 158 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 UIMC1Q96RL1 719 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 MMTAG2Q9BU76 263 aaKnown RBP12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 AMNQ9BXJ7 453 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 PSD3Q9NYI0 1048 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 PRR12Q9ULL5 1215 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 TMX2Q9Y320 296 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 MYH7BA7E2Y1 1941 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 MAP2K7O14733 419 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 TBC1D12O60347 775 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 MCM3P25205 808 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 CAP2P40123 477 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms