RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 DDX11Q96FC9 970 aa6.35□□□□□ -1.39
PDLIM5-211ENST00000508531 BTG4Q9NY30 223 aa6.35□□□□□ -1.39
PDLIM5-211ENST00000508531 MARCH2Q9P0N8 246 aa6.35□□□□□ -1.39
PDLIM5-211ENST00000508531 INPP5FQ9Y2H2 1132 aa6.35□□□□□ -1.39
PDLIM5-211ENST00000508531 THBDP07204 575 aa6.34□□□□□ -1.39
PDLIM5-211ENST00000508531 SMAD4Q13485 552 aaKnown RBP6.34□□□□□ -1.39
PDLIM5-211ENST00000508531 ZFYVE27Q5T4F4 411 aa6.34□□□□□ -1.39
PDLIM5-211ENST00000508531 POMZP3Q6PJE2 187 aa6.34□□□□□ -1.39
PDLIM5-211ENST00000508531 CRACR2BQ8N4Y2 399 aaPredicted RBP6.34□□□□□ -1.39
PDLIM5-211ENST00000508531 PLEKHO2Q8TD55 490 aa6.34□□□□□ -1.39
PDLIM5-211ENST00000508531 DPF3Q92784 378 aa6.34□□□□□ -1.39
PDLIM5-211ENST00000508531 MMP19Q99542 508 aa6.34□□□□□ -1.39
PDLIM5-211ENST00000508531 TGIF2Q9GZN2 237 aa6.34□□□□□ -1.39
PDLIM5-211ENST00000508531 SPATA6Q9NWH7 488 aaPredicted RBP6.34□□□□□ -1.39
PDLIM5-211ENST00000508531 KDM6BO15054 1643 aa6.34□□□□□ -1.39
PDLIM5-211ENST00000508531 ABCC8Q09428 1581 aa6.34□□□□□ -1.39
PDLIM5-211ENST00000508531 DNMBPQ6XZF7 1577 aa6.34□□□□□ -1.39
PDLIM5-211ENST00000508531 TSPOAP1O95153 1857 aa6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 NOP56O00567 594 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 ADRB1P08588 477 aa6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 INF2Q27J81 1249 aa6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 GTF2IRD2BQ6EKJ0 949 aa6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 DBX2Q6ZNG2 339 aa6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 GTF2IRD2Q86UP8 949 aa6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 TEX2Q8IWB9 1127 aa6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 TRIM59Q8IWR1 403 aa6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 DDX1Q92499 740 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 KIAA1522Q9P206 1035 aaPredicted RBP6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 STRIP2Q9ULQ0 834 aa6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 DUSP10Q9Y6W6 482 aa6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 ABCC10Q5T3U5 1492 aa6.33□□□□□ -1.4
PDLIM5-211ENST00000508531 C8BP07358 591 aa6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 CYP2C8P10632 490 aa6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 NAT2P11245 290 aa6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 SARSP49591 514 aaKnown RBP6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 ZNF143P52747 638 aaPredicted RBP6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 EFEMP1Q12805 493 aa6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 SPATS1Q496A3 300 aa6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 GGNQ86UU5 652 aa6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 DCP2Q8IU60 420 aaKnown RBP6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 MRGPRX3Q96LB0 322 aa6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 SYT3Q9BQG1 590 aa6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 CCSER2Q9H7U1 834 aa6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 NTMQ9P121 344 aa6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 MAGI1Q96QZ7 1491 aaPredicted RBP6.32□□□□□ -1.4
PDLIM5-211ENST00000508531 GRIN2BQ13224 1484 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 UNCXA6NJT0 531 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 C22orf46C9J442 243 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 SGSM2O43147 1006 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 SMARCA5O60264 1052 aaPredicted RBP6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 NOBOXO60393 691 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 CNR2P34972 360 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 GJA9P57773 515 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 CYP4F3Q08477 520 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 NCAPHQ15003 741 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 TTLL7Q6ZT98 887 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 FRS2Q8WU20 508 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 GORASP1Q9BQQ3 440 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 AP5M1Q9H0R1 490 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 NKX2-4Q9H2Z4 354 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 CYP26B1Q9NR63 512 aa6.31□□□□□ -1.4
PDLIM5-211ENST00000508531 CCDC88BA6NC98 1476 aa6.3□□□□□ -1.4
PDLIM5-211ENST00000508531 TBX1O43435 398 aa6.3□□□□□ -1.4
PDLIM5-211ENST00000508531 FPR2P25090 351 aa6.3□□□□□ -1.4
PDLIM5-211ENST00000508531 ETV3LQ6ZN32 361 aa6.3□□□□□ -1.4
PDLIM5-211ENST00000508531 ZNF761Q86XN6 746 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-211ENST00000508531 FAM26EQ8N5C1 309 aa6.3□□□□□ -1.4
PDLIM5-211ENST00000508531 NPLOC4Q8TAT6 608 aa6.3□□□□□ -1.4
PDLIM5-211ENST00000508531 UBE2Q2Q8WVN8 375 aa6.3□□□□□ -1.4
PDLIM5-211ENST00000508531 BTN2A2Q8WVV5 523 aa6.3□□□□□ -1.4
PDLIM5-211ENST00000508531 LNPKQ9C0E8 428 aa6.3□□□□□ -1.4
PDLIM5-211ENST00000508531 MRVI1Q9Y6F6 885 aa6.3□□□□□ -1.4
PDLIM5-211ENST00000508531 B2RBV5 119 aa6.29□□□□□ -1.4
PDLIM5-211ENST00000508531 K7ESM1 405 aa6.29□□□□□ -1.4
PDLIM5-211ENST00000508531 SMAD7O15105 426 aaKnown RBP6.29□□□□□ -1.4
PDLIM5-211ENST00000508531 ATF4P18848 351 aaPredicted RBP6.29□□□□□ -1.4
PDLIM5-211ENST00000508531 LARP1BQ659C4 914 aaKnown RBP6.29□□□□□ -1.4
PDLIM5-211ENST00000508531 C6orf15Q6UXA7 325 aaPredicted RBP6.29□□□□□ -1.4
PDLIM5-211ENST00000508531 CD300LDQ6UXZ3 194 aa6.29□□□□□ -1.4
PDLIM5-211ENST00000508531 STK32CQ86UX6 486 aa6.29□□□□□ -1.4
PDLIM5-211ENST00000508531 LINC00482Q8N8I6 264 aa6.29□□□□□ -1.4
PDLIM5-211ENST00000508531 ADAMTS17Q8TE56 1095 aa6.29□□□□□ -1.4
PDLIM5-211ENST00000508531 C11orf84Q9BUA3 381 aaPredicted RBP6.29□□□□□ -1.4
PDLIM5-211ENST00000508531 TMEFF2Q9UIK5 374 aaPredicted RBP6.29□□□□□ -1.4
PDLIM5-211ENST00000508531 CEP170Q5SW79 1584 aa6.28□□□□□ -1.4
PDLIM5-211ENST00000508531 ECI1P42126 302 aa6.28□□□□□ -1.4
PDLIM5-211ENST00000508531 RPL11P62913 178 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-211ENST00000508531 RBM10P98175 930 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-211ENST00000508531 SV2CQ496J9 727 aa6.28□□□□□ -1.4
PDLIM5-211ENST00000508531 HHIPL2Q6UWX4 724 aa6.28□□□□□ -1.4
PDLIM5-211ENST00000508531 MIB1Q86YT6 1006 aa6.28□□□□□ -1.4
PDLIM5-211ENST00000508531 SEC14L1Q92503 715 aa6.28□□□□□ -1.4
PDLIM5-211ENST00000508531 ACTR10Q9NZ32 417 aa6.28□□□□□ -1.4
PDLIM5-211ENST00000508531 PALD1Q9ULE6 856 aa6.28□□□□□ -1.4
PDLIM5-211ENST00000508531 TIMM13Q9Y5L4 95 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-211ENST00000508531 TOP2AP11388 1531 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-211ENST00000508531 PRDM2Q13029 1718 aa6.28□□□□□ -1.4
PDLIM5-211ENST00000508531 ITGAVP06756 1048 aa6.27□□□□□ -1.41
PDLIM5-211ENST00000508531 SNRPB2P08579 225 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-211ENST00000508531 THBS2P35442 1172 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms