RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TTLL10Q6ZVT0 673 aa8.34□□□□□ -1.07
TOPBP1-206ENST00000508524 B3GNT8Q7Z7M8 397 aa8.34□□□□□ -1.07
TOPBP1-206ENST00000508524 ZNF669Q96BR6 464 aaPredicted RBP8.34□□□□□ -1.07
TOPBP1-206ENST00000508524 TRMT2BQ96GJ1 504 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-206ENST00000508524 TMEM169Q96HH4 297 aa8.34□□□□□ -1.07
TOPBP1-206ENST00000508524 AP5M1Q9H0R1 490 aa8.34□□□□□ -1.07
TOPBP1-206ENST00000508524 INHBBP09529 407 aa8.33□□□□□ -1.08
TOPBP1-206ENST00000508524 FGFR1P11362 822 aa8.33□□□□□ -1.08
TOPBP1-206ENST00000508524 HTRA3P83110 453 aa8.33□□□□□ -1.08
TOPBP1-206ENST00000508524 CAP1Q01518 475 aa8.33□□□□□ -1.08
TOPBP1-206ENST00000508524 LSAMPQ13449 338 aa8.33□□□□□ -1.08
TOPBP1-206ENST00000508524 VWA3BQ502W6 1294 aa8.33□□□□□ -1.08
TOPBP1-206ENST00000508524 SPATC1Q76KD6 591 aa8.33□□□□□ -1.08
TOPBP1-206ENST00000508524 TP53I13Q8NBR0 393 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-206ENST00000508524 FNIP1Q8TF40 1166 aa8.33□□□□□ -1.08
TOPBP1-206ENST00000508524 SEC14L1Q92503 715 aa8.33□□□□□ -1.08
TOPBP1-206ENST00000508524 OSBP2Q969R2 916 aa8.33□□□□□ -1.08
TOPBP1-206ENST00000508524 KCNC2Q96PR1 638 aa8.33□□□□□ -1.08
TOPBP1-206ENST00000508524 FAN1Q9Y2M0 1017 aa8.33□□□□□ -1.08
TOPBP1-206ENST00000508524 H7BY64 318 aa8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 U2SURPO15042 1029 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 PDPK1O15530 556 aa8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 BMP7P18075 431 aa8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 GTF2F1P35269 517 aaKnown RBP eCLIP8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 CACNB2Q08289 660 aaPredicted RBP8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 RASGRF1Q13972 1273 aa8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 YOD1Q5VVQ6 348 aaPredicted RBP8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 LRRC47Q8N1G4 583 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 LINC01356Q8N9X3 169 aa8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 MARCH10Q8NA82 808 aaPredicted RBP8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 ARMC5Q96C12 935 aa8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 CDIP1Q9H305 208 aa8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 PMF1-BGLAPU3KQ54 211 aa8.32□□□□□ -1.08
TOPBP1-206ENST00000508524 FFAR3O14843 346 aa8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 PRODHO43272 600 aa8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 MSCO60682 206 aa8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 PABPC1P11940 636 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 SERINC3Q13530 473 aa8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 NTRK3Q16288 839 aa8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 USP53Q70EK8 1073 aa8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 MIB1Q86YT6 1006 aa8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 NLGN1Q8N2Q7 840 aa8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 SMARCC2Q8TAQ2 1214 aa8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 CCDC113Q9H0I3 377 aa8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 PARD6AQ9NPB6 346 aa8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 GPR27Q9NS67 375 aa8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 PPP1R1BQ9UD71 204 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 PALD1Q9ULE6 856 aa8.31□□□□□ -1.08
TOPBP1-206ENST00000508524 C8BP07358 591 aa8.3□□□□□ -1.08
TOPBP1-206ENST00000508524 DLX2Q07687 328 aaPredicted RBP8.3□□□□□ -1.08
TOPBP1-206ENST00000508524 NSMFQ6X4W1 530 aa8.3□□□□□ -1.08
TOPBP1-206ENST00000508524 CHAMP1Q96JM3 812 aa8.3□□□□□ -1.08
TOPBP1-206ENST00000508524 PHF20Q9BVI0 1012 aa8.3□□□□□ -1.08
TOPBP1-206ENST00000508524 CLDND1Q9NY35 253 aa8.3□□□□□ -1.08
TOPBP1-206ENST00000508524 SIRPGQ9P1W8 387 aa8.3□□□□□ -1.08
TOPBP1-206ENST00000508524 RAPGEFL1Q9UHV5 662 aa8.3□□□□□ -1.08
TOPBP1-206ENST00000508524 COA3Q9Y2R0 106 aaPredicted RBP8.3□□□□□ -1.08
TOPBP1-206ENST00000508524 TRAV20A0A0B4J274 112 aa8.29□□□□□ -1.08
TOPBP1-206ENST00000508524 CCDC85CA6NKD9 419 aa8.29□□□□□ -1.08
TOPBP1-206ENST00000508524 ADCY3O60266 1144 aa8.29□□□□□ -1.08
TOPBP1-206ENST00000508524 RBL2Q08999 1139 aa8.29□□□□□ -1.08
TOPBP1-206ENST00000508524 LCE1DQ5T752 114 aa8.29□□□□□ -1.08
TOPBP1-206ENST00000508524 RSPO2Q6UXX9 243 aaPredicted RBP8.29□□□□□ -1.08
TOPBP1-206ENST00000508524 ETV3LQ6ZN32 361 aa8.29□□□□□ -1.08
TOPBP1-206ENST00000508524 MILR1Q7Z6M3 343 aa8.29□□□□□ -1.08
TOPBP1-206ENST00000508524 NOX5Q96PH1 765 aa8.29□□□□□ -1.08
TOPBP1-206ENST00000508524 HIRIP3Q9BW71 556 aaPredicted RBP8.29□□□□□ -1.08
TOPBP1-206ENST00000508524 SPATA9Q9BWV2 254 aa8.29□□□□□ -1.08
TOPBP1-206ENST00000508524 MTERF2Q49AM1 385 aa8.28□□□□□ -1.08
TOPBP1-206ENST00000508524 SAPCD2Q86UD0 394 aa8.28□□□□□ -1.08
TOPBP1-206ENST00000508524 ZCCHC4Q9H5U6 513 aa8.28□□□□□ -1.08
TOPBP1-206ENST00000508524 PPARGC1AQ9UBK2 798 aaKnown RBP8.28□□□□□ -1.08
TOPBP1-206ENST00000508524 ZNF652Q9Y2D9 606 aa8.28□□□□□ -1.08
TOPBP1-206ENST00000508524 BLACEA4D250 179 aa8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 HOXA5P20719 270 aa8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 RASA3Q14644 834 aa8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 EMC4Q5J8M3 183 aa8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 KCNT2Q6UVM3 1135 aa8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 FAM126BQ8IXS8 530 aa8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 FAM26EQ8N5C1 309 aa8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 ZNF526Q8TF50 670 aaPredicted RBP8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 DCAF4Q8WV16 495 aa8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 DDX11Q96FC9 970 aa8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 SYT3Q9BQG1 590 aa8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 EPB41L1Q9H4G0 881 aa8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 LUC7LQ9NQ29 371 aaKnown RBP8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 PFDN2Q9UHV9 154 aa8.27□□□□□ -1.09
TOPBP1-206ENST00000508524 A0A1B0GTL3 188 aa8.26□□□□□ -1.09
TOPBP1-206ENST00000508524 HGSO14964 777 aaPredicted RBP8.26□□□□□ -1.09
TOPBP1-206ENST00000508524 DIAPH1O60610 1272 aaKnown RBP8.26□□□□□ -1.09
TOPBP1-206ENST00000508524 TADA3O75528 432 aa8.26□□□□□ -1.09
TOPBP1-206ENST00000508524 CYP2C8P10632 490 aa8.26□□□□□ -1.09
TOPBP1-206ENST00000508524 SSRP1Q08945 709 aaKnown RBP8.26□□□□□ -1.09
TOPBP1-206ENST00000508524 STEAP3Q658P3 488 aa8.26□□□□□ -1.09
TOPBP1-206ENST00000508524 STYK1Q6J9G0 422 aa8.26□□□□□ -1.09
TOPBP1-206ENST00000508524 ADGRG2Q8IZP9 1017 aa8.26□□□□□ -1.09
TOPBP1-206ENST00000508524 GORASP1Q9BQQ3 440 aa8.26□□□□□ -1.09
TOPBP1-206ENST00000508524 XYLT2Q9H1B5 865 aa8.26□□□□□ -1.09
TOPBP1-206ENST00000508524 SH3D21A4FU49 640 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms