RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 ARHGEF16Q5VV41 709 aa20.86■□□□□ 0.93
SKP2-204ENST00000508514 GDF6Q6KF10 455 aaPredicted RBP20.86■□□□□ 0.93
SKP2-204ENST00000508514 CHST3Q7LGC8 479 aa20.86■□□□□ 0.93
SKP2-204ENST00000508514 MTIF3Q9H2K0 278 aaKnown RBP20.86■□□□□ 0.93
SKP2-204ENST00000508514 PITPNM1O00562 1244 aa20.85■□□□□ 0.93
SKP2-204ENST00000508514 ZBTB5O15062 677 aa20.85■□□□□ 0.93
SKP2-204ENST00000508514 HOXA13P31271 388 aaPredicted RBP20.85■□□□□ 0.93
SKP2-204ENST00000508514 CHMP4BP1P59074 171 aa20.85■□□□□ 0.93
SKP2-204ENST00000508514 GRM4Q14833 912 aa20.85■□□□□ 0.93
SKP2-204ENST00000508514 SESTD1Q86VW0 696 aa20.85■□□□□ 0.93
SKP2-204ENST00000508514 IL31RAQ8NI17 732 aa20.85■□□□□ 0.93
SKP2-204ENST00000508514 DHX38Q92620 1227 aaKnown RBP20.85■□□□□ 0.93
SKP2-204ENST00000508514 EMID1Q96A84 441 aaPredicted RBP20.85■□□□□ 0.93
SKP2-204ENST00000508514 PDCD2LQ9BRP1 358 aa20.85■□□□□ 0.93
SKP2-204ENST00000508514 RIOX1Q9H6W3 641 aa20.85■□□□□ 0.93
SKP2-204ENST00000508514 PCDHA1Q9Y5I3 950 aa20.85■□□□□ 0.93
SKP2-204ENST00000508514 ZBBXA8MT70 800 aa20.84■□□□□ 0.93
SKP2-204ENST00000508514 E7EWF7 191 aa20.84■□□□□ 0.93
SKP2-204ENST00000508514 PFKMP08237 780 aa20.84■□□□□ 0.93
SKP2-204ENST00000508514 ATP2A2P16615 1042 aaKnown RBP20.84■□□□□ 0.93
SKP2-204ENST00000508514 ANTXR2P58335 489 aa20.84■□□□□ 0.93
SKP2-204ENST00000508514 TROAPQ12815 778 aa20.84■□□□□ 0.93
SKP2-204ENST00000508514 PTGISQ16647 500 aa20.84■□□□□ 0.93
SKP2-204ENST00000508514 ZFP91Q96JP5 570 aaPredicted RBP20.84■□□□□ 0.93
SKP2-204ENST00000508514 PIGSQ96S52 555 aa20.84■□□□□ 0.93
SKP2-204ENST00000508514 SLC28A3Q9HAS3 691 aa20.84■□□□□ 0.93
SKP2-204ENST00000508514 PCDHA11Q9Y5I1 949 aa20.84■□□□□ 0.93
SKP2-204ENST00000508514 MYO9BQ13459 2157 aa20.83■□□□□ 0.93
SKP2-204ENST00000508514 KIAA1217Q5T5P2 1943 aa20.83■□□□□ 0.93
SKP2-204ENST00000508514 SGSM2O43147 1006 aa20.83■□□□□ 0.93
SKP2-204ENST00000508514 SP2Q02086 613 aa20.83■□□□□ 0.93
SKP2-204ENST00000508514 COL9A3Q14050 684 aaPredicted RBP20.83■□□□□ 0.93
SKP2-204ENST00000508514 VSIG10LQ86VR7 867 aa20.83■□□□□ 0.93
SKP2-204ENST00000508514 PPM1EQ8WY54 764 aa20.83■□□□□ 0.93
SKP2-204ENST00000508514 GAS2L1Q99501 681 aaPredicted RBP20.83■□□□□ 0.93
SKP2-204ENST00000508514 U3KPZ7 1027 aaPredicted RBP20.83■□□□□ 0.93
SKP2-204ENST00000508514 REV3LO60673 3130 aa20.82■□□□□ 0.92
SKP2-204ENST00000508514 HAS3O00219 553 aa20.82■□□□□ 0.92
SKP2-204ENST00000508514 IFIT3O14879 490 aaKnown RBP20.82■□□□□ 0.92
SKP2-204ENST00000508514 ARHGEF15O94989 841 aa20.82■□□□□ 0.92
SKP2-204ENST00000508514 CASTP20810 708 aaKnown RBP20.82■□□□□ 0.92
SKP2-204ENST00000508514 RFC2P35250 354 aa20.82■□□□□ 0.92
SKP2-204ENST00000508514 HIC1Q14526 733 aa20.82■□□□□ 0.92
SKP2-204ENST00000508514 HOMER1Q86YM7 354 aa20.82■□□□□ 0.92
SKP2-204ENST00000508514 TET1Q8NFU7 2136 aa20.82■□□□□ 0.92
SKP2-204ENST00000508514 IGDCC4Q8TDY8 1250 aa20.82■□□□□ 0.92
SKP2-204ENST00000508514 GPKOWQ92917 476 aaPredicted RBP eCLIP20.82■□□□□ 0.92
SKP2-204ENST00000508514 BCAS3Q9H6U6 928 aa20.82■□□□□ 0.92
SKP2-204ENST00000508514 HDAC6Q9UBN7 1215 aa20.82■□□□□ 0.92
SKP2-204ENST00000508514 MUC3AQ02505 3323 aa20.82■□□□□ 0.92
SKP2-204ENST00000508514 MYH6P13533 1939 aa20.82■□□□□ 0.92
SKP2-204ENST00000508514 MYCLP12524 364 aaPredicted RBP20.81■□□□□ 0.92
SKP2-204ENST00000508514 HOXD8P13378 290 aaPredicted RBP20.81■□□□□ 0.92
SKP2-204ENST00000508514 TRDNQ13061 729 aa20.81■□□□□ 0.92
SKP2-204ENST00000508514 PGM5Q15124 567 aa20.81■□□□□ 0.92
SKP2-204ENST00000508514 DGKDQ16760 1214 aa20.81■□□□□ 0.92
SKP2-204ENST00000508514 TCTN1Q2MV58 587 aa20.81■□□□□ 0.92
SKP2-204ENST00000508514 MYSM1Q5VVJ2 828 aa20.81■□□□□ 0.92
SKP2-204ENST00000508514 RETREG2Q8NC44 543 aa20.81■□□□□ 0.92
SKP2-204ENST00000508514 PPTC7Q8NI37 304 aa20.81■□□□□ 0.92
SKP2-204ENST00000508514 RUFY2Q8WXA3 655 aa20.81■□□□□ 0.92
SKP2-204ENST00000508514 MAP4K1Q92918 833 aa20.81■□□□□ 0.92
SKP2-204ENST00000508514 WNT8BQ93098 351 aa20.81■□□□□ 0.92
SKP2-204ENST00000508514 MAP3K20Q9NYL2 800 aaKnown RBP20.81■□□□□ 0.92
SKP2-204ENST00000508514 GTF2IRD1Q9UHL9 959 aa20.81■□□□□ 0.92
SKP2-204ENST00000508514 MRVI1Q9Y6F6 885 aa20.81■□□□□ 0.92
SKP2-204ENST00000508514 SORBS3O60504 671 aa20.8■□□□□ 0.92
SKP2-204ENST00000508514 F2P00734 622 aa20.8■□□□□ 0.92
SKP2-204ENST00000508514 ZNF286BP0CG31 522 aa20.8■□□□□ 0.92
SKP2-204ENST00000508514 PSEN2P49810 448 aa20.8■□□□□ 0.92
SKP2-204ENST00000508514 ZNF200P98182 395 aaPredicted RBP20.8■□□□□ 0.92
SKP2-204ENST00000508514 BFSP2Q13515 415 aa20.8■□□□□ 0.92
SKP2-204ENST00000508514 LAMC2Q13753 1193 aa20.8■□□□□ 0.92
SKP2-204ENST00000508514 CCDC85BQ15834 202 aaPredicted RBP20.8■□□□□ 0.92
SKP2-204ENST00000508514 HSDL1Q3SXM5 330 aa20.8■□□□□ 0.92
SKP2-204ENST00000508514 TRAF7Q6Q0C0 670 aa20.8■□□□□ 0.92
SKP2-204ENST00000508514 MB21D2Q8IYB1 491 aaPredicted RBP20.8■□□□□ 0.92
SKP2-204ENST00000508514 BAZ2BQ9UIF8 2168 aaKnown RBP20.8■□□□□ 0.92
SKP2-204ENST00000508514 TTC28Q96AY4 2481 aa20.79■□□□□ 0.92
SKP2-204ENST00000508514 EPOPA6NHQ4 379 aa20.79■□□□□ 0.92
SKP2-204ENST00000508514 RFXAPO00287 272 aa20.79■□□□□ 0.92
SKP2-204ENST00000508514 CA3P07451 260 aa20.79■□□□□ 0.92
SKP2-204ENST00000508514 IGFBP4P22692 258 aa20.79■□□□□ 0.92
SKP2-204ENST00000508514 RBL2Q08999 1139 aa20.79■□□□□ 0.92
SKP2-204ENST00000508514 WTAPQ15007 396 aa20.79■□□□□ 0.92
SKP2-204ENST00000508514 TRIM71Q2Q1W2 868 aaKnown RBP20.79■□□□□ 0.92
SKP2-204ENST00000508514 CELF3Q5SZQ8 465 aaKnown RBP20.79■□□□□ 0.92
SKP2-204ENST00000508514 PPP2R2DQ66LE6 453 aa20.79■□□□□ 0.92
SKP2-204ENST00000508514 DHX37Q8IY37 1157 aaKnown RBP20.79■□□□□ 0.92
SKP2-204ENST00000508514 NCOA7Q8NI08 942 aa20.79■□□□□ 0.92
SKP2-204ENST00000508514 ALG1Q9BT22 464 aa20.79■□□□□ 0.92
SKP2-204ENST00000508514 NOD1Q9Y239 953 aa20.79■□□□□ 0.92
SKP2-204ENST00000508514 TRIP12Q14669 1992 aaPredicted RBP20.78■□□□□ 0.92
SKP2-204ENST00000508514 TANC1Q9C0D5 1861 aa20.78■□□□□ 0.92
SKP2-204ENST00000508514 PNMA6FA0A0J9YX94 578 aa20.78■□□□□ 0.92
SKP2-204ENST00000508514 NBNO60934 754 aa20.78■□□□□ 0.92
SKP2-204ENST00000508514 MFSD10Q14728 455 aa20.78■□□□□ 0.92
SKP2-204ENST00000508514 TMEM67Q5HYA8 995 aa20.78■□□□□ 0.92
SKP2-204ENST00000508514 FCHSD1Q86WN1 690 aa20.78■□□□□ 0.92
SKP2-204ENST00000508514 SAMD3Q8N6K7 520 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms