RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 SLITRK6Q9H5Y7 841 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 USP40Q9NVE5 1235 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 ZNF148Q9UQR1 794 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 ARL2BPQ9Y2Y0 163 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 PCDHB13Q9Y5F0 798 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 NUP153P49790 1475 aaKnown RBP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 PLCH2O75038 1416 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 EXOC1LA0A1B0GW35 172 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 LGALS16A8MUM7 142 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 DKC1O60832 514 aaKnown RBP eCLIP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 MT-ND3P03897 115 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 HARSP12081 509 aaKnown RBP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 VPS41P49754 854 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 IQCB1Q15051 598 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 RPS6KA2Q15349 733 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 MMEL1Q495T6 779 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 NXNQ6DKJ4 435 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 CCNI2Q6ZMN8 369 aaPredicted RBP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 HELBQ8NG08 1087 aaPredicted RBP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 KIF2CQ99661 725 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 KIFC3Q9BVG8 833 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 AATFQ9NY61 560 aaKnown RBP eCLIP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 TBC1D7Q9P0N9 293 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 PARP3Q9Y6F1 533 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 MCF2P10911 925 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 SCG2P13521 617 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 CA4P22748 312 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 FKBP3Q00688 224 aaKnown RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 GUCY1A3Q02108 690 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 BYSLQ13895 437 aaKnown RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 CASC4Q6P4E1 433 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 LRRC31Q6UY01 552 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 MCF2L2Q86YR7 1114 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 SIRT2Q8IXJ6 389 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 CATSPER1Q8NEC5 780 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 PAGE5Q96GU1 130 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 CARD10Q9BWT7 1032 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 FTOQ9C0B1 505 aaKnown RBP eCLIP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 GPR108Q9NPR9 543 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 PDP2Q9P2J9 529 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 SH3TC1Q8TE82 1336 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 ZNF532Q9HCE3 1301 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 WDR62O43379 1518 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 FAM187AA6NFU0 413 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 IRS4O14654 1257 aaPredicted RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 PRPF6O94906 941 aaKnown RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 MMP1P03956 469 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 MYCNP04198 464 aaPredicted RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 LSP1P33241 339 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 PMS2P54278 862 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 SLC12A2P55011 1212 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 YWHAEP62258 255 aaKnown RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 CYLC2Q14093 348 aaPredicted RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 ZMYM1Q5SVZ6 1142 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 TEDDM1Q5T9Z0 273 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 TRMT1LQ7Z2T5 733 aaKnown RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 ZNF804AQ7Z570 1209 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 GPBP1Q86WP2 473 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 LZICQ8WZA0 190 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 CCDC138Q96M89 665 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 SLC39A2Q9NP94 309 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 PTPN22Q9Y2R2 807 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 MIF4GDA9UHW6 222 aaKnown RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 SRGAP2O75044 1071 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 GSTA2P09210 222 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 PYGBP11216 843 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 CYP27A1Q02318 531 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 SLC39A6Q13433 755 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 PTPN21Q16825 1174 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 PPWD1Q96BP3 646 aaKnown RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 MRPL40Q9NQ50 206 aaKnown RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 ZNF711Q9Y462 761 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 SOS2Q07890 1332 aaPredicted RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 TRPM2O94759 1503 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 IQANK1A0A1B0GTG1 560 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 TTI1O43156 1089 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 AFPP02771 609 aaKnown RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 PPARAQ07869 468 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 NEK8Q86SG6 692 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 ZC3H15Q8WU90 426 aaKnown RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 SEC16BQ96JE7 1060 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 ZSCAN10Q96SZ4 725 aaPredicted RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 FUT8Q9BYC5 575 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 GOLPH3LQ9H4A5 285 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 NOC2LQ9Y3T9 749 aaKnown RBP7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 COL4A3BPQ9Y5P4 624 aa7.92□□□□□ -1.14
UBE2D3-224ENST00000508474 A0A1W2PQC6 194 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 AGTP01019 485 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 FGAP02671 866 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 DDIT3P35638 169 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 LRRC63Q05C16 580 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 CYB5D1Q6P9G0 228 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 TMEM154Q6P9G4 183 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 RSBN1LQ6PCB5 846 aaPredicted RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 APOA5Q6Q788 366 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 RASGRP2Q7LDG7 609 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 SESTD1Q86VW0 696 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 GSPT2Q8IYD1 628 aaKnown RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 LPIN2Q92539 896 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms