RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 FRMPD4Q14CM0 1322 aa17.32■□□□□ 0.36
TRIO-211ENST00000508343 A0A0U1RQG5 324 aaPredicted RBP17.32■□□□□ 0.36
TRIO-211ENST00000508343 hCG_1984214I3L0E3 225 aa17.32■□□□□ 0.36
TRIO-211ENST00000508343 RGS20O76081 388 aa17.32■□□□□ 0.36
TRIO-211ENST00000508343 SEC24BO95487 1268 aa17.32■□□□□ 0.36
TRIO-211ENST00000508343 CDK7P50613 346 aa17.32■□□□□ 0.36
TRIO-211ENST00000508343 NAPAP54920 295 aa17.32■□□□□ 0.36
TRIO-211ENST00000508343 KCNV1Q6PIU1 500 aa17.32■□□□□ 0.36
TRIO-211ENST00000508343 ANKRD33Q7Z3H0 272 aa17.32■□□□□ 0.36
TRIO-211ENST00000508343 TEX2Q8IWB9 1127 aa17.32■□□□□ 0.36
TRIO-211ENST00000508343 ZNF713Q8N859 430 aaPredicted RBP17.32■□□□□ 0.36
TRIO-211ENST00000508343 IL31RAQ8NI17 732 aa17.32■□□□□ 0.36
TRIO-211ENST00000508343 ZNF274Q96GC6 653 aaPredicted RBP17.32■□□□□ 0.36
TRIO-211ENST00000508343 POLR3EQ9NVU0 708 aa17.32■□□□□ 0.36
TRIO-211ENST00000508343 MRVI1Q9Y6F6 885 aa17.32■□□□□ 0.36
TRIO-211ENST00000508343 A6NJR5 290 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 DCDC2CA8MYV0 355 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 ARVCFO00192 962 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 KPNA6O60684 536 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 PQBP1O60828 265 aaKnown RBP17.31■□□□□ 0.36
TRIO-211ENST00000508343 STAM2O75886 525 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 GH1P01241 217 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 TGFB3P10600 412 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 CCT2P78371 535 aaKnown RBP17.31■□□□□ 0.36
TRIO-211ENST00000508343 PPP1R18Q6NYC8 613 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 XRRA1Q6P2D8 792 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 IL17RAQ96F46 866 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 GDF15Q99988 308 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 SEZ6LQ9BYH1 1024 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 PRO3102Q9H379 93 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 BARHL2Q9NY43 387 aa17.31■□□□□ 0.36
TRIO-211ENST00000508343 RBM27Q9P2N5 1060 aaKnown RBP17.31■□□□□ 0.36
TRIO-211ENST00000508343 MROH7Q68CQ1 1323 aa17.3■□□□□ 0.36
TRIO-211ENST00000508343 STXBP3O00186 592 aa17.3■□□□□ 0.36
TRIO-211ENST00000508343 PRPF3O43395 683 aaKnown RBP17.3■□□□□ 0.36
TRIO-211ENST00000508343 MYL3P08590 195 aa17.3■□□□□ 0.36
TRIO-211ENST00000508343 CLTBP09497 229 aa17.3■□□□□ 0.36
TRIO-211ENST00000508343 BMP8BP34820 402 aa17.3■□□□□ 0.36
TRIO-211ENST00000508343 MAGEA10P43363 369 aaPredicted RBP17.3■□□□□ 0.36
TRIO-211ENST00000508343 MRPS9P82933 396 aaKnown RBP17.3■□□□□ 0.36
TRIO-211ENST00000508343 ARHGAP1Q07960 439 aa17.3■□□□□ 0.36
TRIO-211ENST00000508343 NTRK3Q16288 839 aa17.3■□□□□ 0.36
TRIO-211ENST00000508343 PFKFB3Q16875 520 aaPredicted RBP17.3■□□□□ 0.36
TRIO-211ENST00000508343 HABP4Q5JVS0 413 aaKnown RBP17.3■□□□□ 0.36
TRIO-211ENST00000508343 PCNX4Q63HM2 1172 aa17.3■□□□□ 0.36
TRIO-211ENST00000508343 TYW1BQ6NUM6 668 aa17.3■□□□□ 0.36
TRIO-211ENST00000508343 SLC43A3Q8NBI5 491 aa17.3■□□□□ 0.36
TRIO-211ENST00000508343 ZFP91Q96JP5 570 aaPredicted RBP17.3■□□□□ 0.36
TRIO-211ENST00000508343 ALDH8A1Q9H2A2 487 aaPredicted RBP17.3■□□□□ 0.36
TRIO-211ENST00000508343 RIC8AQ9NPQ8 531 aa17.3■□□□□ 0.36
TRIO-211ENST00000508343 PRDM5Q9NQX1 630 aaPredicted RBP17.3■□□□□ 0.36
TRIO-211ENST00000508343 PDLIM7Q9NR12 457 aa17.3■□□□□ 0.36
TRIO-211ENST00000508343 KIAA1217Q5T5P2 1943 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 SMCO2A6NFE2 343 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 SPDYE3A6NKU9 549 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 SCG2P13521 617 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 IFNAR1P17181 557 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 PURAQ00577 322 aaKnown RBP17.29■□□□□ 0.36
TRIO-211ENST00000508343 AKAP17AQ02040 695 aaKnown RBP17.29■□□□□ 0.36
TRIO-211ENST00000508343 ITGA7Q13683 1181 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 LAMC2Q13753 1193 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 UBE2SQ16763 222 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 GNPTABQ3T906 1256 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 SH3RF1Q7Z6J0 888 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 AFG1LQ8WV93 481 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 PHKBQ93100 1093 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 EMID1Q96A84 441 aaPredicted RBP17.29■□□□□ 0.36
TRIO-211ENST00000508343 INPP4AQ96PE3 977 aaPredicted RBP17.29■□□□□ 0.36
TRIO-211ENST00000508343 LBHD1Q9BQE6 289 aaPredicted RBP17.29■□□□□ 0.36
TRIO-211ENST00000508343 LARP6Q9BRS8 491 aaKnown RBP17.29■□□□□ 0.36
TRIO-211ENST00000508343 MTG1Q9BT17 334 aaPredicted RBP17.29■□□□□ 0.36
TRIO-211ENST00000508343 GLT8D2Q9H1C3 349 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 NCOA5Q9HCD5 579 aaKnown RBP17.29■□□□□ 0.36
TRIO-211ENST00000508343 RTEL1Q9NZ71 1219 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 PCDHA6Q9UN73 950 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 PCDHA8Q9Y5H6 950 aa17.29■□□□□ 0.36
TRIO-211ENST00000508343 RANBP2P49792 3224 aaKnown RBP17.29■□□□□ 0.36
TRIO-211ENST00000508343 GRIN2DO15399 1336 aa17.28■□□□□ 0.36
TRIO-211ENST00000508343 TRIM43BA6NCK2 446 aa17.28■□□□□ 0.36
TRIO-211ENST00000508343 ICAM3P32942 547 aa17.28■□□□□ 0.36
TRIO-211ENST00000508343 ADCY7P51828 1080 aa17.28■□□□□ 0.36
TRIO-211ENST00000508343 FAAP100Q0VG06 881 aa17.28■□□□□ 0.36
TRIO-211ENST00000508343 PKN1Q16512 942 aa17.28■□□□□ 0.36
TRIO-211ENST00000508343 DHX37Q8IY37 1157 aaKnown RBP17.28■□□□□ 0.36
TRIO-211ENST00000508343 TRIM43Q96BQ3 446 aaPredicted RBP17.28■□□□□ 0.36
TRIO-211ENST00000508343 RNF26Q9BY78 433 aaPredicted RBP17.28■□□□□ 0.36
TRIO-211ENST00000508343 TMEM39AQ9NV64 488 aa17.28■□□□□ 0.36
TRIO-211ENST00000508343 SPATA31C2B4DYI2 1134 aa17.27■□□□□ 0.36
TRIO-211ENST00000508343 KIAA0355O15063 1070 aa17.27■□□□□ 0.36
TRIO-211ENST00000508343 TLR3O15455 904 aaKnown RBP17.27■□□□□ 0.36
TRIO-211ENST00000508343 FOSP01100 380 aaPredicted RBP17.27■□□□□ 0.36
TRIO-211ENST00000508343 PSMC6P62333 389 aa17.27■□□□□ 0.36
TRIO-211ENST00000508343 MDM2Q00987 491 aaPredicted RBP17.27■□□□□ 0.36
TRIO-211ENST00000508343 SP2Q02086 613 aa17.27■□□□□ 0.36
TRIO-211ENST00000508343 ANKRD1Q15327 319 aa17.27■□□□□ 0.36
TRIO-211ENST00000508343 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.36
TRIO-211ENST00000508343 MYSM1Q5VVJ2 828 aa17.27■□□□□ 0.36
TRIO-211ENST00000508343 SLC26A6Q9BXS9 759 aa17.27■□□□□ 0.36
TRIO-211ENST00000508343 EHMT1Q9H9B1 1298 aa17.27■□□□□ 0.36
TRIO-211ENST00000508343 PCDH10Q9P2E7 1040 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms