RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 LCORQ96JN0 433 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC13-209ENST00000508304 GPRC5CQ9NQ84 441 aa7.48□□□□□ -1.21
TRAPPC13-209ENST00000508304 THBDP07204 575 aa7.47□□□□□ -1.21
TRAPPC13-209ENST00000508304 SURF1Q15526 300 aa7.47□□□□□ -1.21
TRAPPC13-209ENST00000508304 OR6P1Q8NGX9 317 aa7.47□□□□□ -1.21
TRAPPC13-209ENST00000508304 PPP4R1LQ9P1A2 415 aa7.47□□□□□ -1.21
TRAPPC13-209ENST00000508304 APEX2Q9UBZ4 518 aa7.47□□□□□ -1.21
TRAPPC13-209ENST00000508304 AKT3Q9Y243 479 aa7.47□□□□□ -1.21
TRAPPC13-209ENST00000508304 LAMTOR5O43504 91 aa7.46□□□□□ -1.22
TRAPPC13-209ENST00000508304 ZNF16P17020 682 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC13-209ENST00000508304 ZNF28P17035 718 aa7.46□□□□□ -1.22
TRAPPC13-209ENST00000508304 GDF5P43026 501 aa7.46□□□□□ -1.22
TRAPPC13-209ENST00000508304 SCRN1Q12765 414 aa7.46□□□□□ -1.22
TRAPPC13-209ENST00000508304 INF2Q27J81 1249 aa7.46□□□□□ -1.22
TRAPPC13-209ENST00000508304 CRIP3Q6Q6R5 217 aa7.46□□□□□ -1.22
TRAPPC13-209ENST00000508304 TEX2Q8IWB9 1127 aa7.46□□□□□ -1.22
TRAPPC13-209ENST00000508304 KISS1RQ969F8 398 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC13-209ENST00000508304 EMC9Q9Y3B6 208 aa7.46□□□□□ -1.22
TRAPPC13-209ENST00000508304 ANKRD34BA5PLL1 514 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 C22orf46C9J442 243 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 SLPIP03973 132 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 ACVRL1P37023 503 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 HMGA2P52926 109 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 PAK2Q13177 524 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 ADAM9Q13443 819 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 ICAM4Q14773 271 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 CR1LQ2VPA4 569 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 RIOX2Q8IUF8 465 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 SPATA32Q96LK8 384 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 CD248Q9HCU0 757 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 EFR3BQ9Y2G0 817 aa7.45□□□□□ -1.22
TRAPPC13-209ENST00000508304 CYR61O00622 381 aa7.44□□□□□ -1.22
TRAPPC13-209ENST00000508304 KCNH1O95259 989 aa7.44□□□□□ -1.22
TRAPPC13-209ENST00000508304 STAT5AP42229 794 aa7.44□□□□□ -1.22
TRAPPC13-209ENST00000508304 MILR1Q7Z6M3 343 aa7.44□□□□□ -1.22
TRAPPC13-209ENST00000508304 PLEKHH3Q7Z736 793 aa7.44□□□□□ -1.22
TRAPPC13-209ENST00000508304 Q8N1Y9 231 aa7.44□□□□□ -1.22
TRAPPC13-209ENST00000508304 MBD6Q96DN6 1003 aa7.44□□□□□ -1.22
TRAPPC13-209ENST00000508304 NGRNQ9NPE2 291 aaKnown RBP7.44□□□□□ -1.22
TRAPPC13-209ENST00000508304 KIAA1211LQ6NV74 962 aa7.43□□□□□ -1.22
TRAPPC13-209ENST00000508304 DNERQ8NFT8 737 aa7.43□□□□□ -1.22
TRAPPC13-209ENST00000508304 KLC2Q9H0B6 622 aa7.43□□□□□ -1.22
TRAPPC13-209ENST00000508304 BTG4Q9NY30 223 aa7.43□□□□□ -1.22
TRAPPC13-209ENST00000508304 OVOL3O00110 214 aa7.42□□□□□ -1.22
TRAPPC13-209ENST00000508304 FPR2P25090 351 aa7.42□□□□□ -1.22
TRAPPC13-209ENST00000508304 CYP4F3Q08477 520 aa7.42□□□□□ -1.22
TRAPPC13-209ENST00000508304 MROH9Q5TGP6 573 aa7.42□□□□□ -1.22
TRAPPC13-209ENST00000508304 PRAMEF18Q5VWM3 479 aa7.42□□□□□ -1.22
TRAPPC13-209ENST00000508304 PKN3Q6P5Z2 889 aa7.42□□□□□ -1.22
TRAPPC13-209ENST00000508304 POMZP3Q6PJE2 187 aa7.42□□□□□ -1.22
TRAPPC13-209ENST00000508304 CRACR2BQ8N4Y2 399 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC13-209ENST00000508304 BVESQ8NE79 360 aa7.42□□□□□ -1.22
TRAPPC13-209ENST00000508304 NPLOC4Q8TAT6 608 aa7.42□□□□□ -1.22
TRAPPC13-209ENST00000508304 RASGRP4Q8TDF6 673 aa7.42□□□□□ -1.22
TRAPPC13-209ENST00000508304 YTHDC1Q96MU7 727 aaKnown RBP7.42□□□□□ -1.22
TRAPPC13-209ENST00000508304 X6R8D5 127 aa7.42□□□□□ -1.22
TRAPPC13-209ENST00000508304 GPR42O15529 346 aa7.41□□□□□ -1.22
TRAPPC13-209ENST00000508304 CASP7P55210 303 aa7.41□□□□□ -1.22
TRAPPC13-209ENST00000508304 NKX3-2P78367 333 aa7.41□□□□□ -1.22
TRAPPC13-209ENST00000508304 VHLLQ6RSH7 139 aa7.41□□□□□ -1.22
TRAPPC13-209ENST00000508304 ZNF654Q8IZM8 581 aa7.41□□□□□ -1.22
TRAPPC13-209ENST00000508304 FRS2Q8WU20 508 aa7.41□□□□□ -1.22
TRAPPC13-209ENST00000508304 SHDQ96IW2 340 aa7.41□□□□□ -1.22
TRAPPC13-209ENST00000508304 CDK5RAP1Q96SZ6 601 aaKnown RBP7.41□□□□□ -1.22
TRAPPC13-209ENST00000508304 ZNF747Q9BV97 191 aa7.41□□□□□ -1.22
TRAPPC13-209ENST00000508304 MRIQ9BWK5 157 aa7.41□□□□□ -1.22
TRAPPC13-209ENST00000508304 CYP26B1Q9NR63 512 aa7.41□□□□□ -1.22
TRAPPC13-209ENST00000508304 NPEPPSL1A6NEC2 478 aa7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 CYP1A1P04798 512 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 EPHB4P54760 987 aa7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 RPL11P62913 178 aaKnown RBP7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 PPP2R5EQ16537 467 aa7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 GTF2IRD2BQ6EKJ0 949 aa7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 IQCEQ6IPM2 695 aa7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 GTF2IRD2Q86UP8 949 aa7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 NLRP10Q86W26 655 aa7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 TRIM59Q8IWR1 403 aa7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 HOMEZQ8IX15 550 aa7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 APBA2Q99767 749 aa7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 NKX2-4Q9H2Z4 354 aa7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 ZNF652Q9Y2D9 606 aa7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 TIMM13Q9Y5L4 95 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC13-209ENST00000508304 IL13P35225 146 aa7.39□□□□□ -1.23
TRAPPC13-209ENST00000508304 ZNF143P52747 638 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC13-209ENST00000508304 CIR1Q86X95 450 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC13-209ENST00000508304 ZFPM1Q8IX07 1006 aa7.39□□□□□ -1.23
TRAPPC13-209ENST00000508304 MRGPRX3Q96LB0 322 aa7.39□□□□□ -1.23
TRAPPC13-209ENST00000508304 MENTQ9BUN1 341 aa7.39□□□□□ -1.23
TRAPPC13-209ENST00000508304 TMEM168Q9H0V1 697 aa7.39□□□□□ -1.23
TRAPPC13-209ENST00000508304 VPS11Q9H270 941 aa7.39□□□□□ -1.23
TRAPPC13-209ENST00000508304 L2HGDHQ9H9P8 463 aa7.39□□□□□ -1.23
TRAPPC13-209ENST00000508304 FZD7O75084 574 aa7.38□□□□□ -1.23
TRAPPC13-209ENST00000508304 MLLT6P55198 1093 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC13-209ENST00000508304 PPP2CBP62714 309 aa7.38□□□□□ -1.23
TRAPPC13-209ENST00000508304 PPP2CAP67775 309 aa7.38□□□□□ -1.23
TRAPPC13-209ENST00000508304 CEP68Q76N32 757 aa7.38□□□□□ -1.23
TRAPPC13-209ENST00000508304 IGDCC4Q8TDY8 1250 aa7.38□□□□□ -1.23
TRAPPC13-209ENST00000508304 GPRASP2Q96D09 838 aa7.38□□□□□ -1.23
TRAPPC13-209ENST00000508304 ZSWIM3Q96MP5 696 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms