RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 RGS20O76081 388 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 DDAH1O94760 285 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 CYP2C9P11712 490 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 MYCLP12524 364 aaPredicted RBP16.55■□□□□ 0.24
RAB28-205ENST00000508274 FAM47CQ5HY64 1035 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 ZFP91Q96JP5 570 aaPredicted RBP16.55■□□□□ 0.24
RAB28-205ENST00000508274 SEZ6LQ9BYH1 1024 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 STXBP5LQ9Y2K9 1186 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 EIF3JO75822 258 aaKnown RBP16.54■□□□□ 0.24
RAB28-205ENST00000508274 PLEKHA8P1O95397 391 aa16.54■□□□□ 0.24
RAB28-205ENST00000508274 GH1P01241 217 aa16.54■□□□□ 0.24
RAB28-205ENST00000508274 MMP3P08254 477 aa16.54■□□□□ 0.24
RAB28-205ENST00000508274 CHMP4BP1P59074 171 aa16.54■□□□□ 0.24
RAB28-205ENST00000508274 PGM5Q15124 567 aa16.54■□□□□ 0.24
RAB28-205ENST00000508274 NFXL1Q6ZNB6 911 aa16.54■□□□□ 0.24
RAB28-205ENST00000508274 ZNF365Q70YC5 407 aa16.54■□□□□ 0.24
RAB28-205ENST00000508274 FCHSD1Q86WN1 690 aa16.54■□□□□ 0.24
RAB28-205ENST00000508274 CMTR1Q8N1G2 835 aaKnown RBP16.54■□□□□ 0.24
RAB28-205ENST00000508274 CTCFLQ8NI51 663 aaPredicted RBP16.54■□□□□ 0.24
RAB28-205ENST00000508274 TMEM87BQ96K49 555 aa16.54■□□□□ 0.24
RAB28-205ENST00000508274 TTYH1Q9H313 450 aaPredicted RBP16.54■□□□□ 0.24
RAB28-205ENST00000508274 MAP3K20Q9NYL2 800 aaKnown RBP16.54■□□□□ 0.24
RAB28-205ENST00000508274 GBF1Q92538 1859 aa16.54■□□□□ 0.24
RAB28-205ENST00000508274 DOCK5Q9H7D0 1870 aa16.54■□□□□ 0.24
RAB28-205ENST00000508274 TANC1Q9C0D5 1861 aa16.53■□□□□ 0.24
RAB28-205ENST00000508274 GCOM1H8Y6P7 765 aaPredicted RBP16.53■□□□□ 0.24
RAB28-205ENST00000508274 POLR2MP0CAP2 368 aa16.53■□□□□ 0.24
RAB28-205ENST00000508274 SCLYQ96I15 445 aa16.53■□□□□ 0.24
RAB28-205ENST00000508274 MAP3K14Q99558 947 aa16.53■□□□□ 0.24
RAB28-205ENST00000508274 MTA3Q9BTC8 594 aa16.53■□□□□ 0.24
RAB28-205ENST00000508274 SPZ1Q9BXG8 430 aa16.53■□□□□ 0.24
RAB28-205ENST00000508274 IL23AQ9NPF7 189 aa16.53■□□□□ 0.24
RAB28-205ENST00000508274 DDX41Q9UJV9 622 aaKnown RBP16.53■□□□□ 0.24
RAB28-205ENST00000508274 MRVI1Q9Y6F6 885 aa16.53■□□□□ 0.24
RAB28-205ENST00000508274 TRIP12Q14669 1992 aaPredicted RBP16.52■□□□□ 0.24
RAB28-205ENST00000508274 CCDC69A6NI79 296 aa16.52■□□□□ 0.24
RAB28-205ENST00000508274 SORBS3O60504 671 aa16.52■□□□□ 0.24
RAB28-205ENST00000508274 SRBD1Q8N5C6 995 aaKnown RBP16.52■□□□□ 0.24
RAB28-205ENST00000508274 GPKOWQ92917 476 aaPredicted RBP eCLIP16.52■□□□□ 0.24
RAB28-205ENST00000508274 CHD9Q3L8U1 2897 aa16.52■□□□□ 0.23
RAB28-205ENST00000508274 GRXCR1A8MXD5 290 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 KPNA6O60684 536 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 KIF5BP33176 963 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 LIFRP42702 1097 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 RASIP1Q5U651 963 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 NFRKBQ6P4R8 1299 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 PSRC1Q6PGN9 363 aaPredicted RBP16.51■□□□□ 0.23
RAB28-205ENST00000508274 VSIG10LQ86VR7 867 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 SAMD3Q8N6K7 520 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 KAT2BQ92831 832 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 VWCEQ96DN2 955 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 RRP36Q96EU6 259 aaKnown RBP16.51■□□□□ 0.23
RAB28-205ENST00000508274 TCEANC2Q96MN5 208 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 SEMA6BQ9H3T3 888 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 CXXC1Q9P0U4 656 aaPredicted RBP16.51■□□□□ 0.23
RAB28-205ENST00000508274 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.51■□□□□ 0.23
RAB28-205ENST00000508274 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.51■□□□□ 0.23
RAB28-205ENST00000508274 CDC45O75419 566 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 DNAJB2P25686 324 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 TRAF1Q13077 416 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 RASEFQ8IZ41 740 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 TMTC2Q8N394 836 aa16.51■□□□□ 0.23
RAB28-205ENST00000508274 CHD7Q9P2D1 2997 aa16.5■□□□□ 0.23
RAB28-205ENST00000508274 FRMPD4Q14CM0 1322 aa16.5■□□□□ 0.23
RAB28-205ENST00000508274 hCG_1642624A0A1W2PR95 340 aa16.5■□□□□ 0.23
RAB28-205ENST00000508274 SUPT20HL2P0C7V6 817 aa16.5■□□□□ 0.23
RAB28-205ENST00000508274 ZNF286BP0CG31 522 aa16.5■□□□□ 0.23
RAB28-205ENST00000508274 CCND2P30279 289 aa16.5■□□□□ 0.23
RAB28-205ENST00000508274 SP2Q02086 613 aa16.5■□□□□ 0.23
RAB28-205ENST00000508274 ADCK5Q3MIX3 580 aa16.5■□□□□ 0.23
RAB28-205ENST00000508274 OTOP2Q7RTS6 562 aa16.5■□□□□ 0.23
RAB28-205ENST00000508274 MICU3Q86XE3 530 aa16.5■□□□□ 0.23
RAB28-205ENST00000508274 DHX37Q8IY37 1157 aaKnown RBP16.5■□□□□ 0.23
RAB28-205ENST00000508274 EMID1Q96A84 441 aaPredicted RBP16.5■□□□□ 0.23
RAB28-205ENST00000508274 CCDC136Q96JN2 1154 aa16.5■□□□□ 0.23
RAB28-205ENST00000508274 CDX2Q99626 313 aaPredicted RBP16.5■□□□□ 0.23
RAB28-205ENST00000508274 SLC12A7Q9Y666 1083 aa16.5■□□□□ 0.23
RAB28-205ENST00000508274 TET1Q8NFU7 2136 aa16.49■□□□□ 0.23
RAB28-205ENST00000508274 UBA1P22314 1058 aaKnown RBP16.49■□□□□ 0.23
RAB28-205ENST00000508274 PBX2P40425 430 aa16.49■□□□□ 0.23
RAB28-205ENST00000508274 MRPS9P82933 396 aaKnown RBP16.49■□□□□ 0.23
RAB28-205ENST00000508274 DGKDQ16760 1214 aa16.49■□□□□ 0.23
RAB28-205ENST00000508274 RNF20Q5VTR2 975 aa16.49■□□□□ 0.23
RAB28-205ENST00000508274 GDF6Q6KF10 455 aaPredicted RBP16.49■□□□□ 0.23
RAB28-205ENST00000508274 USP17L6PQ6QN14 398 aa16.49■□□□□ 0.23
RAB28-205ENST00000508274 CCDC82Q8N4S0 544 aa16.49■□□□□ 0.23
RAB28-205ENST00000508274 SLC17A8Q8NDX2 589 aa16.49■□□□□ 0.23
RAB28-205ENST00000508274 PPTC7Q8NI37 304 aa16.49■□□□□ 0.23
RAB28-205ENST00000508274 HERVK_113Q902F9 699 aa16.49■□□□□ 0.23
RAB28-205ENST00000508274 CTAGE1Q96RT6 745 aa16.49■□□□□ 0.23
RAB28-205ENST00000508274 BCAS3Q9H6U6 928 aa16.49■□□□□ 0.23
RAB28-205ENST00000508274 SEC63Q9UGP8 760 aaKnown RBP16.49■□□□□ 0.23
RAB28-205ENST00000508274 RBAK-RBAKDNI3L0D1 243 aa16.48■□□□□ 0.23
RAB28-205ENST00000508274 GGPS1O95749 300 aa16.48■□□□□ 0.23
RAB28-205ENST00000508274 FGBP02675 491 aa16.48■□□□□ 0.23
RAB28-205ENST00000508274 CALM1P0DP23 149 aa16.48■□□□□ 0.23
RAB28-205ENST00000508274 CALM2P0DP24 149 aa16.48■□□□□ 0.23
RAB28-205ENST00000508274 CALM3P0DP25 149 aa16.48■□□□□ 0.23
RAB28-205ENST00000508274 CASTP20810 708 aaKnown RBP16.48■□□□□ 0.23
RAB28-205ENST00000508274 SMARCA1P28370 1054 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms