RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 CHD4Q14839 1912 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 LRP5O75197 1615 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 SPATA31A3Q5VYP0 1347 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 DOCK2Q92608 1830 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CCDC194A0A1B0GVG4 234 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 GRID2IPA4D2P6 1211 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 GOLGA6L10A6NI86 522 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 FGRP09769 529 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CCNYL3P0C7X3 344 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CCNE1P24864 410 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 MTIF2P46199 727 aaKnown RBP5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CDR1P51861 262 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 HERVK_113P62684 666 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 TBC1D8BQ0IIM8 1120 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 PAK2Q13177 524 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 DRP2Q13474 957 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 PLCB4Q15147 1175 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 PTPRNQ16849 979 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 PFKFB3Q16875 520 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CCDC96Q2M329 555 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CCDC152Q4G0S7 254 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CFAP221Q4G0U5 840 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 PKDCCQ504Y2 493 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 PARP10Q53GL7 1025 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 DESI1Q6ICB0 168 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CNNM4Q6P4Q7 775 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 FOXR2Q6PJQ5 311 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 PIK3AP1Q6ZUJ8 805 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 SND1Q7KZF4 910 aaKnown RBP eCLIP5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 YTHDF3Q7Z739 585 aaKnown RBP5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 ANKRD18AQ8IVF6 992 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 ZSCAN29Q8IWY8 852 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 SMYD4Q8IYR2 804 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 BLIDQ8IZY5 108 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 LCORLQ8N3X6 602 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CCDC82Q8N4S0 544 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 RNF10Q8N5U6 811 aaKnown RBP5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CSGALNACT2Q8N6G5 542 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 ENAHQ8N8S7 591 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 EIF1ADQ8N9N8 165 aaKnown RBP5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 DAGLBQ8NCG7 672 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 C3orf20Q8ND61 904 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 WHAMMQ8TF30 809 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 P2RX5Q93086 422 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CAPZA3Q96KX2 299 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CCDC85AQ96PX6 553 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CHP1Q99653 195 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 SH3GL2Q99962 352 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 NCAPGQ9BPX3 1015 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 LZTS2Q9BRK4 669 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 ZKSCAN3Q9BRR0 538 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 TUBGCP2Q9BSJ2 902 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 IFIH1Q9BYX4 1025 aaKnown RBP5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CCSER1Q9C0I3 900 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 BLZF1Q9H2G9 400 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 KDM4CQ9H3R0 1056 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 NHEJ1Q9H9Q4 299 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 SUGCTQ9HAC7 445 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 PRDM11Q9NQV5 511 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 SEC31BQ9NQW1 1179 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 TCP11L1Q9NUJ3 509 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 STIM2Q9P246 746 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 DENND2AQ9ULE3 1009 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 REXO2Q9Y3B8 237 aaKnown RBP5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 FAM169AQ9Y6X4 670 aa5.51□□□□□ -1.53
HMGB3P16-201ENST00000508037 CNTNAP5Q8WYK1 1306 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 GOLGA6L7A0A1B0GV03 622 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 MINDY4BA8MYZ0 360 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 HMGB1P1B2RPK0 211 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 PJA2O43164 708 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 PRKAB2O43741 272 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 DGAT1O75907 488 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 LCA5LO95447 670 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 MCM7P33993 719 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 IL6STP40189 918 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 CCT5P48643 541 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 GNGT1P63211 74 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 TROAPQ12815 778 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 CHRNA2Q15822 529 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 IFI16Q16666 785 aaKnown RBP5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 TUSC1Q2TAM9 212 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 CFAP58Q5T655 872 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 EMC10Q5UCC4 262 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 TTI2Q6NXR4 508 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 C8orf74Q6P047 294 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 WDR59Q6PJI9 974 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 ARMC9Q7Z3E5 817 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 TAX1BP1Q86VP1 789 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 CCDC50Q8IVM0 306 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 DNAJC10Q8IXB1 793 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 CYP4X1Q8N118 509 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 MREGQ8N565 214 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 OTUD6BQ8N6M0 293 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 BCAS4Q8TDM0 211 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 CNOT6LQ96LI5 555 aaKnown RBP5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 NOX5Q96PH1 765 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 TSG101Q99816 390 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 PAGR1Q9BTK6 254 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 NOC4LQ9BVI4 516 aaKnown RBP5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 CRNKL1Q9BZJ0 848 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms