RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 CPSF6Q16630 551 aaKnown RBP eCLIP4.13□□□□□ -1.75
CCDC30-212ENST00000507855 BRAPQ7Z569 592 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 KIAA0907Q7Z7F0 614 aaPredicted RBP4.13□□□□□ -1.75
CCDC30-212ENST00000507855 SYT3Q9BQG1 590 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 PHF20Q9BVI0 1012 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 JAM3Q9BX67 310 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 GTPBP4Q9BZE4 634 aaKnown RBP4.13□□□□□ -1.75
CCDC30-212ENST00000507855 EPN3Q9H201 632 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 TRIM39Q9HCM9 518 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 FRMD4BQ9Y2L6 1034 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 TMA7Q9Y2S6 64 aaKnown RBP4.13□□□□□ -1.75
CCDC30-212ENST00000507855 SF3B6Q9Y3B4 125 aaKnown RBP4.13□□□□□ -1.75
CCDC30-212ENST00000507855 SIT1Q9Y3P8 196 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 ABCC9O60706 1549 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 KCNK3O14649 394 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 ANP32CO43423 234 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 IGHDP01880 384 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 FAM163BP0C2L3 166 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 FUT4P22083 530 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 BDNFP23560 247 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 TNNT2P45379 298 aaPredicted RBP4.13□□□□□ -1.75
CCDC30-212ENST00000507855 RBM5P52756 815 aaKnown RBP eCLIP4.13□□□□□ -1.75
CCDC30-212ENST00000507855 DNAJC21Q5F1R6 531 aaKnown RBP4.13□□□□□ -1.75
CCDC30-212ENST00000507855 PMM1Q92871 262 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 SHISA4Q96DD7 197 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 MAF1Q9H063 256 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 BCAS3Q9H6U6 928 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 CGNQ9P2M7 1197 aaKnown RBP4.13□□□□□ -1.75
CCDC30-212ENST00000507855 IMPACTQ9P2X3 320 aa4.13□□□□□ -1.75
CCDC30-212ENST00000507855 CTDP1Q9Y5B0 961 aaPredicted RBP4.13□□□□□ -1.75
CCDC30-212ENST00000507855 SCO2A0A1W2PP80 73 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 CCDC189A1A4V9 331 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 DNAJC8O75937 253 aaPredicted RBP4.12□□□□□ -1.75
CCDC30-212ENST00000507855 CCDC172P0C7W6 258 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 KCNA6P17658 529 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 HOXC12P31275 282 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 BCL6P41182 706 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 PABPC4Q13310 644 aaKnown RBP eCLIP4.12□□□□□ -1.75
CCDC30-212ENST00000507855 TMEM67Q5HYA8 995 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 MFSD4BQ5TF39 518 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 POMZP3Q6PJE2 187 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 CEP128Q6ZU80 1094 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 TMPRSS7Q7RTY8 843 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 MAP6Q96JE9 813 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 MAP7D2Q96T17 732 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 ARPC5LQ9BPX5 153 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 IRF2BPLQ9H1B7 796 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 PUF60Q9UHX1 559 aaKnown RBP4.12□□□□□ -1.75
CCDC30-212ENST00000507855 NRBP1Q9UHY1 535 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 FEZ2Q9UHY8 353 aaPredicted RBP4.12□□□□□ -1.75
CCDC30-212ENST00000507855 TMEM59LQ9UK28 342 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 COQ6Q9Y2Z9 468 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 NPHP3-ACAD11A0A0J9YXS1 232 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 AGRPO00253 132 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 MPHOSPH10O00566 681 aaKnown RBP4.12□□□□□ -1.75
CCDC30-212ENST00000507855 ENPP3O14638 875 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 PAX7P23759 505 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 GRIK1P39086 918 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 RIPK4P57078 832 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 MVKQ03426 396 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 ANGEL2Q5VTE6 544 aaKnown RBP4.12□□□□□ -1.75
CCDC30-212ENST00000507855 SCUBE1Q8IWY4 988 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 TTC30BQ8N4P2 665 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 ZCRB1Q8TBF4 217 aaKnown RBP4.12□□□□□ -1.75
CCDC30-212ENST00000507855 APPBP2Q92624 585 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 IPO9Q96P70 1041 aaKnown RBP4.12□□□□□ -1.75
CCDC30-212ENST00000507855 PRR13Q9NZ81 148 aa4.12□□□□□ -1.75
CCDC30-212ENST00000507855 ANGEL1Q9UNK9 670 aaKnown RBP4.12□□□□□ -1.75
CCDC30-212ENST00000507855 BAZ1BQ9UIG0 1483 aaKnown RBP4.11□□□□□ -1.75
CCDC30-212ENST00000507855 SSU72P8A0A1W2PR75 194 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 PARNO95453 639 aaKnown RBP4.11□□□□□ -1.75
CCDC30-212ENST00000507855 WNT11O96014 354 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 SRGAP2CP0DJJ0 459 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 ANP32AP39687 249 aaKnown RBP4.11□□□□□ -1.75
CCDC30-212ENST00000507855 RTP1P59025 263 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 ZRSR2Q15696 482 aaKnown RBP4.11□□□□□ -1.75
CCDC30-212ENST00000507855 RCSD1Q6JBY9 416 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 RNF111Q6ZNA4 994 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 SLCO6A1Q86UG4 719 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 VSIG10LQ86VR7 867 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 ACRBPQ8NEB7 543 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 ZSWIM2Q8NEG5 633 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 KCTD13Q8WZ19 329 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 TNPO3Q9Y5L0 923 aaKnown RBP4.11□□□□□ -1.75
CCDC30-212ENST00000507855 NPFFR2Q9Y5X5 522 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 A0A087X0B3 334 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 CFAP69A5D8W1 941 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 SKILP12757 684 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 GP2P55259 537 aaKnown RBP4.11□□□□□ -1.75
CCDC30-212ENST00000507855 PCBP1Q15365 356 aaKnown RBP eCLIP4.11□□□□□ -1.75
CCDC30-212ENST00000507855 HSF5Q4G112 596 aaPredicted RBP4.11□□□□□ -1.75
CCDC30-212ENST00000507855 PLEKHG4Q58EX7 1191 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 EEF1DP3Q658K8 133 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 INTS5Q6P9B9 1019 aaKnown RBP4.11□□□□□ -1.75
CCDC30-212ENST00000507855 C16orf86Q6ZW13 317 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.11□□□□□ -1.75
CCDC30-212ENST00000507855 NAT16Q8N8M0 369 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 ZNF669Q96BR6 464 aaPredicted RBP4.11□□□□□ -1.75
CCDC30-212ENST00000507855 KCNJ15Q99712 375 aa4.11□□□□□ -1.75
CCDC30-212ENST00000507855 MARCH2Q9P0N8 246 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms