RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 SEMA6BQ9H3T3 888 aa18.69■□□□□ 0.58
HOXC4-203ENST00000507650 DDX41Q9UJV9 622 aaKnown RBP18.69■□□□□ 0.58
HOXC4-203ENST00000507650 FRMPD4Q14CM0 1322 aa18.69■□□□□ 0.58
HOXC4-203ENST00000507650 PNMA6FA0A0J9YX94 578 aa18.68■□□□□ 0.58
HOXC4-203ENST00000507650 ERICH2A1L162 156 aa18.68■□□□□ 0.58
HOXC4-203ENST00000507650 PGM5Q15124 567 aa18.68■□□□□ 0.58
HOXC4-203ENST00000507650 ZNF697Q5TEC3 545 aa18.68■□□□□ 0.58
HOXC4-203ENST00000507650 CATIPQ7Z7H3 387 aa18.68■□□□□ 0.58
HOXC4-203ENST00000507650 RAB11FIP4Q86YS3 637 aa18.68■□□□□ 0.58
HOXC4-203ENST00000507650 CMTR1Q8N1G2 835 aaKnown RBP18.68■□□□□ 0.58
HOXC4-203ENST00000507650 SCLYQ96I15 445 aa18.68■□□□□ 0.58
HOXC4-203ENST00000507650 MPHOSPH6Q99547 160 aaKnown RBP18.68■□□□□ 0.58
HOXC4-203ENST00000507650 IL23AQ9NPF7 189 aa18.68■□□□□ 0.58
HOXC4-203ENST00000507650 ANO2Q9NQ90 1003 aa18.68■□□□□ 0.58
HOXC4-203ENST00000507650 REV3LO60673 3130 aa18.68■□□□□ 0.58
HOXC4-203ENST00000507650 EIF3JO75822 258 aaKnown RBP18.67■□□□□ 0.58
HOXC4-203ENST00000507650 DDAH1O94760 285 aa18.67■□□□□ 0.58
HOXC4-203ENST00000507650 PBX2P40425 430 aa18.67■□□□□ 0.58
HOXC4-203ENST00000507650 SP2Q02086 613 aa18.67■□□□□ 0.58
HOXC4-203ENST00000507650 SART3Q15020 963 aaKnown RBP18.67■□□□□ 0.58
HOXC4-203ENST00000507650 RASEFQ8IZ41 740 aa18.67■□□□□ 0.58
HOXC4-203ENST00000507650 TMEM199Q8N511 208 aa18.67■□□□□ 0.58
HOXC4-203ENST00000507650 SRBD1Q8N5C6 995 aaKnown RBP18.67■□□□□ 0.58
HOXC4-203ENST00000507650 MAP3K14Q99558 947 aa18.67■□□□□ 0.58
HOXC4-203ENST00000507650 SPZ1Q9BXG8 430 aa18.67■□□□□ 0.58
HOXC4-203ENST00000507650 SEZ6LQ9BYH1 1024 aa18.67■□□□□ 0.58
HOXC4-203ENST00000507650 BCAS3Q9H6U6 928 aa18.67■□□□□ 0.58
HOXC4-203ENST00000507650 GH1P01241 217 aa18.66■□□□□ 0.58
HOXC4-203ENST00000507650 VSIG10LQ86VR7 867 aa18.66■□□□□ 0.58
HOXC4-203ENST00000507650 EMID1Q96A84 441 aaPredicted RBP18.66■□□□□ 0.58
HOXC4-203ENST00000507650 CDX2Q99626 313 aaPredicted RBP18.66■□□□□ 0.58
HOXC4-203ENST00000507650 MTA3Q9BTC8 594 aa18.66■□□□□ 0.58
HOXC4-203ENST00000507650 VCANP13611 3396 aa18.65■□□□□ 0.58
HOXC4-203ENST00000507650 B4DLN1 442 aa18.65■□□□□ 0.58
HOXC4-203ENST00000507650 SORBS3O60504 671 aa18.65■□□□□ 0.58
HOXC4-203ENST00000507650 MYCLP12524 364 aaPredicted RBP18.65■□□□□ 0.58
HOXC4-203ENST00000507650 DNAJB2P25686 324 aa18.65■□□□□ 0.58
HOXC4-203ENST00000507650 MCM5P33992 734 aa18.65■□□□□ 0.58
HOXC4-203ENST00000507650 MRPL12P52815 198 aaKnown RBP18.65■□□□□ 0.58
HOXC4-203ENST00000507650 MRPS9P82933 396 aaKnown RBP18.65■□□□□ 0.58
HOXC4-203ENST00000507650 SEMA3FQ13275 785 aa18.65■□□□□ 0.58
HOXC4-203ENST00000507650 ADCK5Q3MIX3 580 aa18.65■□□□□ 0.58
HOXC4-203ENST00000507650 NFRKBQ6P4R8 1299 aa18.65■□□□□ 0.58
HOXC4-203ENST00000507650 FCHSD1Q86WN1 690 aa18.65■□□□□ 0.58
HOXC4-203ENST00000507650 HERVK_113Q902F9 699 aa18.65■□□□□ 0.58
HOXC4-203ENST00000507650 TCEANC2Q96MN5 208 aa18.65■□□□□ 0.58
HOXC4-203ENST00000507650 MAP3K20Q9NYL2 800 aaKnown RBP18.65■□□□□ 0.58
HOXC4-203ENST00000507650 TELO2Q9Y4R8 837 aa18.65■□□□□ 0.58
HOXC4-203ENST00000507650 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.64■□□□□ 0.57
HOXC4-203ENST00000507650 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.64■□□□□ 0.57
HOXC4-203ENST00000507650 GCOM1H8Y6P7 765 aaPredicted RBP18.64■□□□□ 0.57
HOXC4-203ENST00000507650 POLR2MP0CAP2 368 aa18.64■□□□□ 0.57
HOXC4-203ENST00000507650 HOXD8P13378 290 aaPredicted RBP18.64■□□□□ 0.57
HOXC4-203ENST00000507650 HIC1Q14526 733 aa18.64■□□□□ 0.57
HOXC4-203ENST00000507650 FAM47CQ5HY64 1035 aa18.64■□□□□ 0.57
HOXC4-203ENST00000507650 GDF6Q6KF10 455 aaPredicted RBP18.64■□□□□ 0.57
HOXC4-203ENST00000507650 PSRC1Q6PGN9 363 aaPredicted RBP18.64■□□□□ 0.57
HOXC4-203ENST00000507650 CASC1Q6TDU7 716 aa18.64■□□□□ 0.57
HOXC4-203ENST00000507650 MYLIPQ8WY64 445 aa18.64■□□□□ 0.57
HOXC4-203ENST00000507650 DHX38Q92620 1227 aaKnown RBP18.64■□□□□ 0.57
HOXC4-203ENST00000507650 TMEM87BQ96K49 555 aa18.64■□□□□ 0.57
HOXC4-203ENST00000507650 PBX4Q9BYU1 374 aa18.64■□□□□ 0.57
HOXC4-203ENST00000507650 MRVI1Q9Y6F6 885 aa18.64■□□□□ 0.57
HOXC4-203ENST00000507650 SIP14410 1827 aa18.64■□□□□ 0.57
HOXC4-203ENST00000507650 hCG_1642624A0A1W2PR95 340 aa18.63■□□□□ 0.57
HOXC4-203ENST00000507650 MEIS2O14770 477 aa18.63■□□□□ 0.57
HOXC4-203ENST00000507650 KPNA6O60684 536 aa18.63■□□□□ 0.57
HOXC4-203ENST00000507650 ZNF286BP0CG31 522 aa18.63■□□□□ 0.57
HOXC4-203ENST00000507650 UBA1P22314 1058 aaKnown RBP18.63■□□□□ 0.57
HOXC4-203ENST00000507650 LIFRP42702 1097 aa18.63■□□□□ 0.57
HOXC4-203ENST00000507650 GPNMBQ14956 572 aa18.63■□□□□ 0.57
HOXC4-203ENST00000507650 HSDL1Q3SXM5 330 aa18.63■□□□□ 0.57
HOXC4-203ENST00000507650 MYSM1Q5VVJ2 828 aa18.63■□□□□ 0.57
HOXC4-203ENST00000507650 USP17L6PQ6QN14 398 aa18.63■□□□□ 0.57
HOXC4-203ENST00000507650 OTOP2Q7RTS6 562 aa18.63■□□□□ 0.57
HOXC4-203ENST00000507650 SAMD3Q8N6K7 520 aa18.63■□□□□ 0.57
HOXC4-203ENST00000507650 HAS3O00219 553 aa18.62■□□□□ 0.57
HOXC4-203ENST00000507650 F2P00734 622 aa18.62■□□□□ 0.57
HOXC4-203ENST00000507650 EXOSC10Q01780 885 aaKnown RBP18.62■□□□□ 0.57
HOXC4-203ENST00000507650 GRIN2CQ14957 1233 aa18.62■□□□□ 0.57
HOXC4-203ENST00000507650 SESTD1Q86VW0 696 aa18.62■□□□□ 0.57
HOXC4-203ENST00000507650 SGMS1Q86VZ5 419 aa18.62■□□□□ 0.57
HOXC4-203ENST00000507650 PPTC7Q8NI37 304 aa18.62■□□□□ 0.57
HOXC4-203ENST00000507650 CTCFLQ8NI51 663 aaPredicted RBP18.62■□□□□ 0.57
HOXC4-203ENST00000507650 WNT8BQ93098 351 aa18.62■□□□□ 0.57
HOXC4-203ENST00000507650 GGPS1O95749 300 aa18.61■□□□□ 0.57
HOXC4-203ENST00000507650 SMARCA1P28370 1054 aa18.61■□□□□ 0.57
HOXC4-203ENST00000507650 CHMP4BP1P59074 171 aa18.61■□□□□ 0.57
HOXC4-203ENST00000507650 PTPN11Q06124 597 aaPredicted RBP18.61■□□□□ 0.57
HOXC4-203ENST00000507650 BRDTQ58F21 947 aaPredicted RBP18.61■□□□□ 0.57
HOXC4-203ENST00000507650 CELF3Q5SZQ8 465 aaKnown RBP18.61■□□□□ 0.57
HOXC4-203ENST00000507650 NFXL1Q6ZNB6 911 aa18.61■□□□□ 0.57
HOXC4-203ENST00000507650 TMTC3Q6ZXV5 915 aa18.61■□□□□ 0.57
HOXC4-203ENST00000507650 SLC17A8Q8NDX2 589 aa18.61■□□□□ 0.57
HOXC4-203ENST00000507650 BRPF3Q9ULD4 1205 aa18.61■□□□□ 0.57
HOXC4-203ENST00000507650 YBX2Q9Y2T7 364 aaKnown RBP18.61■□□□□ 0.57
HOXC4-203ENST00000507650 TRANK1O15050 2925 aa18.61■□□□□ 0.57
HOXC4-203ENST00000507650 CNTNAP5Q8WYK1 1306 aa18.6■□□□□ 0.57
HOXC4-203ENST00000507650 TMEM265A0A087WTH1 108 aa18.6■□□□□ 0.57
HOXC4-203ENST00000507650 CDC45O75419 566 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms