RNA–Protein interactions for RNA: ENST00000507516.3

COL6A4P2-203, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 738 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-203ENST00000507516 H3BNC9 293 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 GPAA1O43292 621 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 AMHP03971 560 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 SLC3A2P08195 630 aaKnown RBP11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 GNAT2P19087 354 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 EDNRBP24530 442 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 HTRA4P83105 476 aaPredicted RBP11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 GPM6BQ13491 265 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 CCDC96Q2M329 555 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 RNF207Q6ZRF8 634 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 RASGRP2Q7LDG7 609 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 MYOCDQ8IZQ8 938 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 SP7Q8TDD2 431 aaPredicted RBP11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 AFG1LQ8WV93 481 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 RANBP17Q9H2T7 1088 aaKnown RBP11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 CHMP4BQ9H444 224 aaKnown RBP11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 NSUN3Q9H649 340 aaKnown RBP11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 CLDND1Q9NY35 253 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 GTF2IRD1Q9UHL9 959 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
COL6A4P2-203ENST00000507516 NCK2O43639 380 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 LGR5O75473 907 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 ARIH2O95376 493 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 MMP3P08254 477 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 FOXK2Q01167 660 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 SMAD2Q15796 467 aaKnown RBP11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 C8orf34Q49A92 452 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 ZNF618Q5T7W0 954 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 IER5LQ5T953 404 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 IFNL3Q8IZI9 196 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 C7orf31Q8N865 590 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 KAT2BQ92831 832 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 PRRX2Q99811 253 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 NACAP1Q9BZK3 213 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 UPF2Q9HAU5 1272 aaKnown RBP11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 SCN10AQ9Y5Y9 1956 aa11.1□□□□□ -0.63
COL6A4P2-203ENST00000507516 B4DLN1 442 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 PATL2C9JE40 543 aaKnown RBP11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 RNF113AO15541 343 aaKnown RBP11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 GFRA3O60609 400 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 GH1P01241 217 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 CASTP20810 708 aaKnown RBP11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 SLC16A2P36021 539 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 MRPL12P52815 198 aaKnown RBP11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 RPS6P62753 249 aaKnown RBP11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 PTK7Q13308 1070 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 MBTPS1Q14703 1052 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 CLUL1Q15846 466 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 PKN1Q16512 942 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 TRIM71Q2Q1W2 868 aaKnown RBP11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 SYDE2Q5VT97 1194 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 TTBK2Q6IQ55 1244 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 TRAF7Q6Q0C0 670 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 BMP8AQ7Z5Y6 402 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 RPAINQ86UA6 219 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 FBXO11Q86XK2 927 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 RNF135Q8IUD6 432 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 TMEM192Q8IY95 271 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 KBTBD3Q8NAB2 608 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 DNERQ8NFT8 737 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 DCAF4Q8WV16 495 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 CLEC4DQ8WXI8 215 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 EDAQ92838 391 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 YME1L1Q96TA2 773 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 HDAC6Q9UBN7 1215 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 DDX19BQ9UMR2 479 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 EMSYQ7Z589 1322 aa11.09□□□□□ -0.63
COL6A4P2-203ENST00000507516 TSPY2A6NKD2 308 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 RBAK-RBAKDNI3L0D1 243 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 M0R2C6 588 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 NMT2O60551 498 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 IGHDP01880 384 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 ZFYP08048 801 aaPredicted RBP11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 LTBRP36941 435 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 PPARAQ07869 468 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 ARHGAP1Q07960 439 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 TCF15Q12870 199 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 MKRN4PQ13434 485 aaPredicted RBP11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 DGKDQ16760 1214 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 CCDC62Q6P9F0 684 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 BTNL9Q6UXG8 535 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 CHST3Q7LGC8 479 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 SUGP1Q8IWZ8 645 aaKnown RBP11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 SIRT2Q8IXJ6 389 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 DBF4BQ8NFT6 615 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 PBXIP1Q96AQ6 731 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 ALG1Q9BT22 464 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 KATNAL1Q9BW62 490 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 IL17RBQ9NRM6 502 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 PNMA2Q9UL42 364 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 ZNF318Q5VUA4 2279 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 CACNA1AO00555 2505 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 ZFHX2Q9C0A1 2572 aaPredicted RBP11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 TET1Q8NFU7 2136 aa11.08□□□□□ -0.64
COL6A4P2-203ENST00000507516 TMEM221A6NGB7 291 aa11.07□□□□□ -0.64
COL6A4P2-203ENST00000507516 M0R296 226 aa11.07□□□□□ -0.64
COL6A4P2-203ENST00000507516 STXBP3O00186 592 aa11.07□□□□□ -0.64
COL6A4P2-203ENST00000507516 MBTPS2O43462 519 aa11.07□□□□□ -0.64
COL6A4P2-203ENST00000507516 PSEN2P49810 448 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms