RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 MLXIPQ9HAP2 919 aa16.66■□□□□ 0.26
HERC6-206ENST00000506714 SSU72P8A0A1W2PR75 194 aa16.66■□□□□ 0.26
HERC6-206ENST00000506714 HSF2BPO75031 334 aa16.66■□□□□ 0.26
HERC6-206ENST00000506714 TECP42680 631 aa16.66■□□□□ 0.26
HERC6-206ENST00000506714 SLC35G1Q2M3R5 365 aa16.66■□□□□ 0.26
HERC6-206ENST00000506714 FAM196AQ6ZSG2 479 aa16.66■□□□□ 0.26
HERC6-206ENST00000506714 LRRC27Q9C0I9 530 aa16.66■□□□□ 0.26
HERC6-206ENST00000506714 NUCKS1Q9H1E3 243 aaKnown RBP16.66■□□□□ 0.26
HERC6-206ENST00000506714 MMRN2Q9H8L6 949 aa16.66■□□□□ 0.26
HERC6-206ENST00000506714 ZNF287Q9HBT7 754 aa16.66■□□□□ 0.26
HERC6-206ENST00000506714 NAV1Q8NEY1 1877 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 SHTN1A0MZ66 631 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 RGL2O15211 777 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 RPS6KA4O75676 772 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 SMARCA1P28370 1054 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
HERC6-206ENST00000506714 ZNF772Q68DY9 489 aaPredicted RBP16.65■□□□□ 0.26
HERC6-206ENST00000506714 SMIM5Q71RC9 77 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 NOX5Q96PH1 765 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 TMEM47Q9BQJ4 181 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 SLC39A2Q9NP94 309 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 FAM207AQ9NSI2 230 aaPredicted RBP16.65■□□□□ 0.26
HERC6-206ENST00000506714 RTCBQ9Y3I0 505 aaKnown RBP16.65■□□□□ 0.26
HERC6-206ENST00000506714 SMCO2A6NFE2 343 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 KLRF2D3W0D1 207 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 KLRK1P26718 216 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 SKOR1P84550 965 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 PSMD2Q13200 908 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 CFAP221Q4G0U5 840 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 SOGA3Q5TF21 947 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 RRAGAQ7L523 313 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 TADA2BQ86TJ2 420 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 HDAC7Q8WUI4 952 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 MMTAG2Q9BU76 263 aaKnown RBP16.65■□□□□ 0.26
HERC6-206ENST00000506714 PLEKHA4Q9H4M7 779 aa16.65■□□□□ 0.26
HERC6-206ENST00000506714 LUC7LQ9NQ29 371 aaKnown RBP16.65■□□□□ 0.26
HERC6-206ENST00000506714 USP17L3A6NCW0 530 aa16.64■□□□□ 0.25
HERC6-206ENST00000506714 USP17L4A6NCW7 530 aa16.64■□□□□ 0.25
HERC6-206ENST00000506714 LRRC53A6NM62 1247 aa16.64■□□□□ 0.25
HERC6-206ENST00000506714 EIF3HO15372 352 aaKnown RBP eCLIP16.64■□□□□ 0.25
HERC6-206ENST00000506714 APBA1Q02410 837 aa16.64■□□□□ 0.25
HERC6-206ENST00000506714 EZH2Q15910 746 aaKnown RBP16.64■□□□□ 0.25
HERC6-206ENST00000506714 HAUS3Q68CZ6 603 aa16.64■□□□□ 0.25
HERC6-206ENST00000506714 C8orf74Q6P047 294 aa16.64■□□□□ 0.25
HERC6-206ENST00000506714 NFRKBQ6P4R8 1299 aa16.64■□□□□ 0.25
HERC6-206ENST00000506714 USP17L1Q7RTZ2 530 aa16.64■□□□□ 0.25
HERC6-206ENST00000506714 PACS2Q86VP3 889 aa16.64■□□□□ 0.25
HERC6-206ENST00000506714 IFT20Q8IY31 132 aa16.64■□□□□ 0.25
HERC6-206ENST00000506714 DRC1Q96MC2 740 aa16.64■□□□□ 0.25
HERC6-206ENST00000506714 RIC8AQ9NPQ8 531 aa16.64■□□□□ 0.25
HERC6-206ENST00000506714 TFCP2L1Q9NZI6 479 aa16.64■□□□□ 0.25
HERC6-206ENST00000506714 BAG3O95817 575 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 GSTO1P78417 241 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 CACNA2D4Q7Z3S7 1137 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 RRP36Q96EU6 259 aaKnown RBP16.63■□□□□ 0.25
HERC6-206ENST00000506714 DYNLL2Q96FJ2 89 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 TSG101Q99816 390 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 RAB34Q9BZG1 259 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 STX8Q9UNK0 236 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 ZPR1O75312 459 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 TMEM266Q2M3C6 531 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 ASTE1Q2TB18 679 aaPredicted RBP16.63■□□□□ 0.25
HERC6-206ENST00000506714 PDXDC1Q6P996 788 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 PROM2Q8N271 834 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 BCAS4Q8TDM0 211 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 IPO4Q8TEX9 1081 aaKnown RBP16.63■□□□□ 0.25
HERC6-206ENST00000506714 BAP1Q92560 729 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 LARP4BQ92615 738 aaKnown RBP16.63■□□□□ 0.25
HERC6-206ENST00000506714 SYN2Q92777 582 aaPredicted RBP16.63■□□□□ 0.25
HERC6-206ENST00000506714 CDK5RAP3Q96JB5 506 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 SEC63Q9UGP8 760 aaKnown RBP16.63■□□□□ 0.25
HERC6-206ENST00000506714 NARFQ9UHQ1 456 aa16.63■□□□□ 0.25
HERC6-206ENST00000506714 ESYT2A0FGR8 921 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 RBAK-RBAKDNI3L0D1 243 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 EPHB6O15197 1021 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 MATR3P43243 847 aaKnown RBP eCLIP16.62■□□□□ 0.25
HERC6-206ENST00000506714 CCT5P48643 541 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 FXR2P51116 673 aaKnown RBP eCLIP16.62■□□□□ 0.25
HERC6-206ENST00000506714 GNGT1P63211 74 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 GRB10Q13322 594 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 ICE2Q659A1 982 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 BICDL1Q6ZP65 573 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 TLR10Q9BXR5 811 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 NYXQ9GZU5 481 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 BLOC1S4Q9NUP1 217 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 MYMKA6NI61 221 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 hCG_1984214I3L0E3 225 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 LDHBP07195 334 aaKnown RBP16.62■□□□□ 0.25
HERC6-206ENST00000506714 SLC7A5Q01650 507 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 PDIA5Q14554 519 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 SLC4A8Q2Y0W8 1093 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 ZNF713Q8N859 430 aaPredicted RBP16.62■□□□□ 0.25
HERC6-206ENST00000506714 WDR66Q8TBY9 1149 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 TBCKQ8TEA7 893 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 NLRP3Q96P20 1036 aa16.62■□□□□ 0.25
HERC6-206ENST00000506714 NKRFO15226 690 aaKnown RBP eCLIP16.61■□□□□ 0.25
HERC6-206ENST00000506714 TRIM37O94972 964 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 PPP4CP60510 307 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 SLC9C1Q4G0N8 1177 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 KLHDC7AQ5VTJ3 777 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms