RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 GOLGA6L10A6NI86 522 aa18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 RBAK-RBAKDNI3L0D1 243 aa18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 GFPT1Q06210 699 aaPredicted RBP18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 PDE4DQ08499 809 aa18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 CRYMQ14894 314 aa18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 CEP57Q86XR8 500 aa18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 INPP4AQ96PE3 977 aaPredicted RBP18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 NDST4Q9H3R1 872 aa18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 MAGEF1Q9HAY2 307 aa18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 FAM205AQ6ZU69 1335 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 RREB1Q92766 1687 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 SSU72P8A0A1W2PR75 194 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 GCOM1H8Y6P7 765 aaPredicted RBP18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 IRS4O14654 1257 aaPredicted RBP18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 MYZAPP0CAP1 466 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 SLC1A4P43007 532 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 XRCC4Q13426 336 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 QPCTQ16769 361 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 COBLL1Q53SF7 1204 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 RRAGAQ7L523 313 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 FAXDC2Q96IV6 333 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 PLIN2Q99541 437 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 TRIM9Q9C026 710 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 CUEDC2Q9H467 287 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 HAUS2Q9NVX0 235 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 MYH1P12882 1939 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 PCDH11XQ9BZA7 1347 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 PCDH11YQ9BZA8 1340 aa18.87■□□□□ 0.61
SQSTM1-211ENST00000506690 BYSLQ13895 437 aaKnown RBP18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 TLDC1Q6P9B6 456 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 CCDC84Q86UT8 332 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 TAX1BP1Q86VP1 789 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 TAF1DQ9H5J8 278 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 LEMD3Q9Y2U8 911 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 COL5A2P05997 1499 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 RAD51CO43502 376 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 PAEPP09466 180 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 FGRP09769 529 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 CALML3P27482 149 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 HSD17B3P37058 310 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 SCTRP47872 440 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 HGSNATQ68CP4 663 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 ADGRA1Q86SQ6 560 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 TEX11Q8IYF3 940 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 BLIDQ8IZY5 108 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 CCDC47Q96A33 483 aaKnown RBP18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 SEC16BQ96JE7 1060 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 ISCUQ9H1K1 167 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 TMEM60Q9H2L4 133 aa18.86■□□□□ 0.61
SQSTM1-211ENST00000506690 SNAP23O00161 211 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 FCER1AP12319 257 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 EZRP15311 586 aaKnown RBP18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 ECHS1P30084 290 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 IFFO1Q0D2I5 559 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 HLFQ16534 295 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 SEMA6BQ9H3T3 888 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 MMRN2Q9H8L6 949 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 ATP6V0A4Q9HBG4 840 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 TMEM59LQ9UK28 342 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 IL2RBP14784 551 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 SATB1Q01826 763 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 BIRC3Q13489 604 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 CCDC178Q5BJE1 867 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 CENPPQ6IPU0 288 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 PDXDC1Q6P996 788 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 ARMC9Q7Z3E5 817 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 P3H4Q92791 437 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 C7orf25Q9BPX7 421 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 CARD10Q9BWT7 1032 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 ABCA3Q99758 1704 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 ABCB11O95342 1321 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 FLT1P17948 1338 aa18.85■□□□□ 0.61
SQSTM1-211ENST00000506690 MGRN1O60291 552 aa18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 PALMO75781 387 aa18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 SLC8A1P32418 973 aa18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 ZNF844Q08AG5 666 aa18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 UAP1Q16222 522 aaPredicted RBP18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 MEI1Q5TIA1 1274 aa18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 PDE8AO60658 829 aa18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 MAN2A1Q16706 1144 aa18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 USP38Q8NB14 1042 aa18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 KIAA0895Q8NCT3 520 aa18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 EDEM3Q9BZQ6 932 aa18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 LRP2BPQ9P2M1 347 aa18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 PCDHGC5Q9Y5F6 944 aa18.84■□□□□ 0.61
SQSTM1-211ENST00000506690 M0R2N6 131 aa18.83■□□□□ 0.61
SQSTM1-211ENST00000506690 SSBP05455 408 aaKnown RBP eCLIP18.83■□□□□ 0.61
SQSTM1-211ENST00000506690 PLCG1P19174 1290 aa18.83■□□□□ 0.61
SQSTM1-211ENST00000506690 CYP7A1P22680 504 aa18.83■□□□□ 0.61
SQSTM1-211ENST00000506690 ERVK-9P63128 1117 aa18.83■□□□□ 0.61
SQSTM1-211ENST00000506690 TNNC1P63316 161 aa18.83■□□□□ 0.61
SQSTM1-211ENST00000506690 NKX1-1Q15270 411 aaPredicted RBP18.83■□□□□ 0.61
SQSTM1-211ENST00000506690 NAB2Q15742 525 aa18.83■□□□□ 0.61
SQSTM1-211ENST00000506690 CACNA2D3Q8IZS8 1091 aa18.83■□□□□ 0.61
SQSTM1-211ENST00000506690 TATDN2Q93075 761 aa18.83■□□□□ 0.61
SQSTM1-211ENST00000506690 SCLT1Q96NL6 688 aa18.83■□□□□ 0.61
SQSTM1-211ENST00000506690 PCDHA4Q9UN74 947 aa18.83■□□□□ 0.61
SQSTM1-211ENST00000506690 BAZ2AQ9UIF9 1905 aaKnown RBP18.83■□□□□ 0.61
SQSTM1-211ENST00000506690 DNAJC8O75937 253 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms