RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 DMRTA1Q5VZB9 504 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 TMTC3Q6ZXV5 915 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 CMTR1Q8N1G2 835 aaKnown RBP8.39□□□□□ -1.07
GYPB-206ENST00000506516 ANKLE1Q8NAG6 615 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 UPF3BQ9BZI7 483 aaKnown RBP8.39□□□□□ -1.07
GYPB-206ENST00000506516 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.39□□□□□ -1.07
GYPB-206ENST00000506516 KIAA1468Q9P260 1216 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 OGDHLQ9ULD0 1010 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 FAM184BQ9ULE4 1060 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 PARP14Q460N5 1801 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 GCOM1H8Y6P7 765 aaPredicted RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 SMAPO00193 183 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 SNAI1O95863 264 aaPredicted RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 POLR2MP0CAP2 368 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 ZNF865P0CJ78 1059 aaPredicted RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 RARBP10826 455 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 AKR1A1P14550 325 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 TAL1P17542 331 aaPredicted RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 DNAJB2P25686 324 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 PDIA3P30101 505 aaKnown RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 SSTR3P32745 418 aaPredicted RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 ADD1P35611 737 aaKnown RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 ALDH5A1P51649 535 aaPredicted RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 EVCP57679 992 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 AKAP17AQ02040 695 aaKnown RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 C8orf34Q49A92 452 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 CPLX2Q6PUV4 134 aaKnown RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 ARMCX2Q7L311 632 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 ARRDC4Q8NCT1 418 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 TRPV1Q8NER1 839 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 NSUN6Q8TEA1 469 aaKnown RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 TBC1D5Q92609 795 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 CUL5Q93034 780 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 ZNF274Q96GC6 653 aaPredicted RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 IWS1Q96ST2 819 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 SLC4A5Q9BY07 1137 aa8.38□□□□□ -1.07
GYPB-206ENST00000506516 ALDH8A1Q9H2A2 487 aaPredicted RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 FAM217BQ9NTX9 383 aaPredicted RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 ZHX1Q9UKY1 873 aaPredicted RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 V9GY48 417 aaPredicted RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 COL11A1P12107 1806 aaPredicted RBP8.38□□□□□ -1.07
GYPB-206ENST00000506516 CPLX1O14810 134 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 PPP1R11O60927 126 aaPredicted RBP8.37□□□□□ -1.07
GYPB-206ENST00000506516 CDC27P30260 824 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 HSD17B4P51659 736 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 NEK4P51957 841 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 CCT2P78371 535 aaKnown RBP8.37□□□□□ -1.07
GYPB-206ENST00000506516 TOB2Q14106 344 aaPredicted RBP8.37□□□□□ -1.07
GYPB-206ENST00000506516 SLC35G1Q2M3R5 365 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 CCDC144BQ3MJ40 725 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 ARHGEF16Q5VV41 709 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 IQSEC1Q6DN90 963 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 SLC30A10Q6XR72 485 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 NECAB2Q7Z6G3 386 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 SYTL5Q8TDW5 730 aaPredicted RBP8.37□□□□□ -1.07
GYPB-206ENST00000506516 MORC4Q8TE76 937 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 IL17RAQ96F46 866 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 FGD4Q96M96 766 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 PURBQ96QR8 312 aaKnown RBP8.37□□□□□ -1.07
GYPB-206ENST00000506516 TAAR1Q96RJ0 339 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 RMDN3Q96TC7 470 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 C22orf23Q9BZE7 217 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 SPC25Q9HBM1 224 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 VTA1Q9NP79 307 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 RABGEF1Q9UJ41 708 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 PLXNB2O15031 1838 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 ZNF236Q9UL36 1845 aa8.37□□□□□ -1.07
GYPB-206ENST00000506516 BRCA2P51587 3418 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 hCG_1984214I3L0E3 225 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 DUSP11O75319 330 aaKnown RBP8.36□□□□□ -1.07
GYPB-206ENST00000506516 EIF3JO75822 258 aaKnown RBP8.36□□□□□ -1.07
GYPB-206ENST00000506516 FARP2O94887 1054 aaPredicted RBP8.36□□□□□ -1.07
GYPB-206ENST00000506516 GHRHRQ02643 423 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 TNFAIP2Q03169 654 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 STXBP2Q15833 593 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 ANO1Q5XXA6 986 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 NOL8Q76FK4 1167 aaKnown RBP8.36□□□□□ -1.07
GYPB-206ENST00000506516 EEPD1Q7L9B9 569 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 HEATR3Q7Z4Q2 680 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 RNF180Q86T96 592 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 TEX2Q8IWB9 1127 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 TRIM22Q8IYM9 498 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 ZNF713Q8N859 430 aaPredicted RBP8.36□□□□□ -1.07
GYPB-206ENST00000506516 SMARCC2Q8TAQ2 1214 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 RNF166Q96A37 237 aaPredicted RBP8.36□□□□□ -1.07
GYPB-206ENST00000506516 SHISA4Q96DD7 197 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 HTATIP2Q9BUP3 242 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 GLT8D2Q9H1C3 349 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 SLKQ9H2G2 1235 aaPredicted RBP8.36□□□□□ -1.07
GYPB-206ENST00000506516 PSTPIP2Q9H939 334 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 XPNPEP3Q9NQH7 507 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 DOCK3Q8IZD9 2030 aa8.36□□□□□ -1.07
GYPB-206ENST00000506516 ASTN1O14525 1302 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 CNTNAP5Q8WYK1 1306 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 hCG_1642624A0A1W2PR95 340 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 KBTBD13C9JR72 458 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 PIK3CDO00329 1044 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 DNM1LO00429 736 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 OPLAHO14841 1288 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 PRPF3O43395 683 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms